RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 RABGEF1Q9UJ41 708 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 TCRBV9S1A1TA0A576 114 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 SPDYE2BA6NHP3 402 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 A6NJR5 290 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 HNRNPCL1O60812 293 aaKnown RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 TMEM63AO94886 807 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 SPDYE6P0CI01 402 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 T-ENOLP0DO92 83 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 TCN1P20061 433 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 KLRC2P26717 231 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 MMP14P50281 582 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 WNT7BP56706 349 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 DSG1Q02413 1049 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 CCDC15Q0P6D6 951 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 MED21Q13503 144 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 C15orf59Q2T9L4 293 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 MMEL1Q495T6 779 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 PLEKHG4Q58EX7 1191 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 XKR3Q5GH77 459 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 TMEM63BQ5T3F8 832 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 RIPOR1Q6ZS17 1223 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 SESTD1Q86VW0 696 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 NCAPG2Q86XI2 1143 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 SULF1Q8IWU6 871 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 C12orf56Q8IXR9 622 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 SERAC1Q96JX3 654 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 SCYL1Q96KG9 808 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 AGAP3Q96P47 875 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 ZNF184Q99676 751 aaPredicted RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 MIPEPQ99797 713 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 TRIM56Q9BRZ2 755 aaKnown RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 TIPINQ9BVW5 301 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 NIF3L1Q9GZT8 377 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 VCX3AQ9NNX9 186 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 SAR1AQ9NR31 198 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 STRIP2Q9ULQ0 834 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 INPP5FQ9Y2H2 1132 aa6.85□□□□□ -1.31
CSDE1-203ENST00000358528 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.85□□□□□ -1.31
CSDE1-203ENST00000358528 PTPRJQ12913 1337 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 SHANK3Q9BYB0 1731 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 CCDC189A1A4V9 331 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 TMEM191CA6NGB0 347 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 AIM2O14862 343 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 TM9SF1O15321 606 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 MED7O43513 233 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 ZC3H11AO75152 810 aaKnown RBP eCLIP6.84□□□□□ -1.315e-6■□□□□ 9.7
CSDE1-203ENST00000358528 LYPLA1O75608 230 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-203ENST00000358528 NEK3P51956 506 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 YWHAEP62258 255 aaKnown RBP6.84□□□□□ -1.31
CSDE1-203ENST00000358528 SNRPFP62306 86 aaKnown RBP6.84□□□□□ -1.31
CSDE1-203ENST00000358528 OGDHQ02218 1023 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 MCL1Q07820 350 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 PEX6Q13608 980 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 TFDP2Q14188 446 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 DPYSL3Q14195 570 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 TTC39BQ5VTQ0 682 aaPredicted RBP6.84□□□□□ -1.31
CSDE1-203ENST00000358528 IRGCQ6NXR0 463 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 RNF148Q8N7C7 305 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 TTLL6Q8N841 843 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 APOPT1Q96IL0 206 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 CLMNQ96JQ2 1002 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 ACSS2Q9NR19 701 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 FAM49BQ9NUQ9 324 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 ASNSD1Q9NWL6 643 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 DNAJC16Q9Y2G8 782 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 UBIAD1Q9Y5Z9 338 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 PRR5-ARHGAP8B1AHC4 643 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 KIF3CO14782 793 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 DHX15O43143 795 aaKnown RBP6.84□□□□□ -1.31
CSDE1-203ENST00000358528 PFDN1O60925 122 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 HSPA4LO95757 839 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 TOP3BO95985 862 aaKnown RBP6.84□□□□□ -1.31
CSDE1-203ENST00000358528 ALADP13716 330 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 MIPP30301 263 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 ABCG1P45844 678 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 ARHGAP8P85298 464 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 MOGSQ13724 837 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 MAP7Q14244 749 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 PPP1R15BQ5SWA1 713 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 PLEKHA7Q6IQ23 1121 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 CES3Q6UWW8 571 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 DENND5BQ6ZUT9 1274 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 RAPH1Q70E73 1250 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 GALNT4Q8N4A0 578 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 RBM15BQ8NDT2 890 aaKnown RBP6.84□□□□□ -1.31
CSDE1-203ENST00000358528 GSTCDQ8NEC7 633 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 SLCO2A1Q92959 643 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 ACSS3Q9H6R3 686 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 QTRT2Q9H974 415 aaKnown RBP6.84□□□□□ -1.31
CSDE1-203ENST00000358528 USP18Q9UMW8 372 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 RIPK3Q9Y572 518 aa6.84□□□□□ -1.31
CSDE1-203ENST00000358528 A0A0B4J269 797 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 GRIN3BO60391 1043 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 UGT1A9O60656 530 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 WFS1O76024 890 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 FGFR1P11362 822 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 MMP8P22894 467 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 KDELR1P24390 212 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 TYK2P29597 1187 aa6.84□□□□□ -1.32
CSDE1-203ENST00000358528 DEUP1Q05D60 604 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms