RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 TSEN34Q9BSV6 310 aaKnown RBP4.83□□□□□ -1.64
SYNE2-203ENST00000357395 RPL3P39023 403 aaKnown RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 KCNA1Q09470 495 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 FAPQ12884 760 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 MAPRE1Q15691 268 aaKnown RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 NAB2Q15742 525 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 TTC39BQ5VTQ0 682 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 CCDC24Q8N4L8 307 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 CCDC185Q8N715 623 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 CPNE5Q9HCH3 593 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 NPHS2Q9NP85 383 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 DDX18Q9NVP1 670 aaKnown RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 PLAGL2Q9UPG8 496 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 MEMO1Q9Y316 297 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 PTCH1Q13635 1447 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 CFTRP13569 1480 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 SNRPAP09012 282 aaKnown RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 RBM34P42696 430 aaKnown RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 NR2C2P49116 596 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 SCN1BQ07699 218 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 FAM160B1Q5W0V3 765 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 PLET1Q6UQ28 207 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ZBTB8OSQ8IWT0 167 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 GPALPP1Q8IXQ4 340 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 SPAG4Q9NPE6 437 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 PANK4Q9NVE7 773 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 PCDHGB6Q9Y5F9 930 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 PRKG1Q13976 671 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ZNF772Q68DY9 489 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 LRRC47Q8N1G4 583 aaKnown RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ERGIC2Q96RQ1 377 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 DHX33Q9H6R0 707 aaKnown RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 TRAFD1O14545 582 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 YWHABP31946 246 aaKnown RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 CKAP2Q8WWK9 683 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 CD248Q9HCU0 757 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 COMMD9Q9P000 198 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 DRG1Q9Y295 367 aaKnown RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 KRT34O76011 436 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ACSL3O95573 720 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 GRIA1P42261 906 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 CARTPTQ16568 116 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 KBTBD2Q8IY47 623 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 CCDC17Q96LX7 622 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 TMBIM4Q9HC24 238 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 MAGI1Q96QZ7 1491 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 FAM228BP0C875 321 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 IFNAR2P48551 515 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 TMEM31Q5JXX7 168 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 C11orf57Q6ZUT1 292 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 KCNV2Q8TDN2 545 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 RGS17Q9UGC6 210 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 B3GNT3Q9Y2A9 372 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 MAGEB6P1A0A0J9YX57 407 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 TMEM120BA0PK00 339 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 SERPINA6P08185 405 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 SULT2A1Q06520 285 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 PRKAA1Q13131 559 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ADAM9Q13443 819 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ACAP1Q15027 740 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 SLC9C2Q5TAH2 1124 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 JARID2Q92833 1246 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ZNF518BQ9C0D4 1074 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 MTMR10Q9NXD2 777 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 TMEM216Q9P0N5 145 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 CDK12Q9NYV4 1490 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 PSME3P61289 254 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 C2orf54Q08AI8 447 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 PDK1Q15118 436 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 GNASQ5JWF2 1037 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 DHDDSQ86SQ9 333 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ZDHHC13Q8IUH4 622 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 RDH11Q8TC12 318 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ADGRL2O95490 1459 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ATRXP46100 2492 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 TCF3P15923 654 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ARHGDIBP52566 201 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 SLC7A5Q01650 507 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ZC3H12CQ9C0D7 883 aaKnown RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 RPN2P04844 631 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 IFRD2Q12894 506 aaPredicted RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 NFYCQ13952 458 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 TMED2Q15363 201 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 NDUFAF6Q330K2 333 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ANKRD13DQ6ZTN6 518 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 SPATA6LQ8N4H0 392 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 DNAJC11Q9NVH1 559 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 SH3BP1Q9Y3L3 701 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 SPAG17Q6Q759 2223 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ABCA10Q8WWZ4 1543 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 hCG_2014768A0A024R1R8 64 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 TRIM49BA6NDI0 452 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 TRIM49D1C9J1S8 452 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 SRGNP10124 158 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 GSPT1P15170 499 aaKnown RBP4.82□□□□□ -1.64
SYNE2-203ENST00000357395 ATPAF2Q8N5M1 289 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 KDM1BQ8NB78 822 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 TATDN2Q93075 761 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 MGAT4AQ9UM21 535 aa4.82□□□□□ -1.64
SYNE2-203ENST00000357395 PTPRKQ15262 1439 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms