RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 UBXN6Q9BZV1 441 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 MTRRQ9UBK8 725 aa19.08■□□□□ 0.65
SMARCD3-202ENST00000356800 GBF1Q92538 1859 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 DDX3YO15523 660 aaKnown RBP19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 ADAM12O43184 909 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 VNN2O95498 520 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 CXCR5P32302 372 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 NDUFV1P49821 464 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 TUBB4BP68371 445 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 NFE2Q16621 373 aaPredicted RBP19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 CFAP221Q4G0U5 840 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 RAB41Q5JT25 222 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 C9orf50Q5SZB4 431 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 DDX53Q86TM3 631 aaKnown RBP19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 ZDHHC17Q8IUH5 632 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 NDRG1Q92597 394 aaKnown RBP19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 PBKQ96KB5 322 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 HERC2P3Q9BVR0 1158 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 DMAP1Q9NPF5 467 aaPredicted RBP19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 ABI2Q9NYB9 513 aaPredicted RBP19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 IP6K2Q9UHH9 426 aa19.08■□□□□ 0.64
SMARCD3-202ENST00000356800 CTAGE15A4D2H0 777 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 MIF4GDA9UHW6 222 aaKnown RBP19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 GRAP2O75791 330 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 CTAGE8P0CG41 777 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 MARCKSL1P49006 195 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 ARPP19P56211 112 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 GPR17Q13304 367 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 PSMD5Q16401 504 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 ZNF572Q7Z3I7 529 aaPredicted RBP19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 CTAGE6Q86UF2 777 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 CTAGE4Q8IX94 777 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 TTC9BQ8N6N2 239 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 ATAD1Q8NBU5 361 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 KRT35Q92764 455 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 FUBP3Q96I24 572 aaKnown RBP eCLIP19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 RPGRIP1Q96KN7 1286 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 PGLYRP2Q96PD5 576 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 LCMT1Q9UIC8 334 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 BACE2Q9Y5Z0 518 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 CDY1Q9Y6F8 540 aa19.07■□□□□ 0.64
SMARCD3-202ENST00000356800 CARNS1A5YM72 827 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 F8VP50 259 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 C2CD2LO14523 706 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 TLL1O43897 1013 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 RPL17P18621 184 aaKnown RBP19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 MAN1A1P33908 653 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 PPM1AP35813 382 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 FLT3P36888 993 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 MAGEA10P43363 369 aaPredicted RBP19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 TKTL1P51854 596 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 RNASE9P60153 205 aaKnown RBP19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 DSG1Q02413 1049 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 RNF19BQ6ZMZ0 732 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 FBXO22Q8NEZ5 403 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 FNIP1Q8TF40 1166 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 ALG3Q92685 438 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 CAPZA3Q96KX2 299 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 OXCT2Q9BYC2 517 aaPredicted RBP19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 MTIF3Q9H2K0 278 aaKnown RBP19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 LRRC4Q9HBW1 653 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 AAASQ9NRG9 546 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 PCDHB5Q9Y5E4 795 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 PCDHB12Q9Y5F1 795 aa19.06■□□□□ 0.64
SMARCD3-202ENST00000356800 MTMR11A4FU01 709 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 C2CD4BA6NLJ0 364 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 DYNC1I1O14576 645 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 KCNK3O14649 394 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 SPOPO43791 374 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 CPB1P15086 417 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 SCNN1AP37088 669 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 SLC1A1P43005 524 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 GLUD2P49448 558 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 ITIH3Q06033 890 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 SLC8B1Q6J4K2 584 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 KIAA1841Q6NSI8 718 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 RSRC2Q7L4I2 434 aaKnown RBP19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 SLC26A9Q7LBE3 791 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 NIPA2Q8N8Q9 360 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 CLSTN3Q9BQT9 956 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 ULBP1Q9BZM6 244 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 GREB1Q4ZG55 1949 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 CEP290O15078 2479 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 PDE2AO00408 941 aaPredicted RBP19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 FGF18O76093 207 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 PSMA2P25787 234 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 GRIK1P39086 918 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 PEX5P50542 639 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 MRPS5P82675 430 aaKnown RBP19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 DCAF12L1Q5VU92 463 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 SIX6OS1Q8N1H7 587 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 ARFGAP1Q8N6T3 406 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 RXFP2Q8WXD0 754 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 GOLGA1Q92805 767 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 CRISPLD1Q9H336 500 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 PNPLA8Q9NP80 782 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 USTQ9Y2C2 406 aa19.05■□□□□ 0.64
SMARCD3-202ENST00000356800 MYO16Q9Y6X6 1858 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 WDR27A2RRH5 827 aa19.04■□□□□ 0.64
SMARCD3-202ENST00000356800 TNFRSF10BO14763 440 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms