RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 ZNF143P52747 638 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 ADCY1Q08828 1119 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 SMARCB1Q12824 385 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 GPR17Q13304 367 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 ACAP1Q15027 740 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 TAF5Q15542 800 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 VSTM1Q6UX27 236 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 RSPO2Q6UXX9 243 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 SIX6OS1Q8N1H7 587 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 CLEC4CQ8WTT0 213 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 ALG3Q92685 438 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 CLP1Q92989 425 aaKnown RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 CAPZA3Q96KX2 299 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 CNGB3Q9NQW8 809 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 AAASQ9NRG9 546 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 SPG21Q9NZD8 308 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 ZMYND8Q9ULU4 1186 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 BACE2Q9Y5Z0 518 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 SLC4A7Q9Y6M7 1214 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 PDE2AO00408 941 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 PSTPIP1O43586 416 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 FBXO21O94952 628 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 GPD1P21695 349 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 CYP2F1P24903 491 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 PSMA2P25787 234 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 GTF2F1P35269 517 aaKnown RBP eCLIP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 FLT3P36888 993 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 MAGEA11P43364 429 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 MARCKSL1P49006 195 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 TKTL1P51854 596 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 MRPS5P82675 430 aaKnown RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 CKAP4Q07065 602 aaKnown RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 EFHC1Q5JVL4 640 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 RASIP1Q5U651 963 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 DCAF12L1Q5VU92 463 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 SLC8B1Q6J4K2 584 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 TRNP1Q6NT89 227 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 GPRIN1Q7Z2K8 1008 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 ZNF572Q7Z3I7 529 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 DDX53Q86TM3 631 aaKnown RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 HERC6Q8IVU3 1022 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 RHOT1Q8IXI2 618 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 FIBCD1Q8N539 461 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 MNS1Q8NEH6 495 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 SP7Q8TDD2 431 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 ACTRT1Q8TDG2 376 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 ABHD8Q96I13 439 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 RAD9AQ99638 391 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 LBHD1Q9BQE6 289 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 CNPY3Q9BT09 278 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 ZBED2Q9BTP6 218 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 MTIF3Q9H2K0 278 aaKnown RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 ASNSD1Q9NWL6 643 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 MTRRQ9UBK8 725 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 STK39Q9UEW8 545 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 TTC7AQ9ULT0 858 aaPredicted RBP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.09□□□□□ -0.79
NPHP1-202ENST00000355301 PCDHB5Q9Y5E4 795 aa10.09□□□□□ -0.79
NPHP1-202ENST00000355301 DPYSL4O14531 572 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 SART1O43290 800 aaKnown RBP10.08□□□□□ -0.8
NPHP1-202ENST00000355301 HSF2BPO75031 334 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 LRCH4O75427 683 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 GRAP2O75791 330 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 GLI1P08151 1106 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 CPB1P15086 417 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 PDGFRAP16234 1089 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 ATP2A2P16615 1042 aaKnown RBP10.08□□□□□ -0.8
NPHP1-202ENST00000355301 NDUFV1P49821 464 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 RWDD2BP57060 319 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 RNASE9P60153 205 aaKnown RBP10.08□□□□□ -0.8
NPHP1-202ENST00000355301 DSG1Q02413 1049 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 PSMD5Q16401 504 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 LRRC38Q5VT99 294 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 DAB2IPQ5VWQ8 1189 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 KIAA1841Q6NSI8 718 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 CC2D1AQ6P1N0 951 aaPredicted RBP10.08□□□□□ -0.8
NPHP1-202ENST00000355301 PRSS55Q6UWB4 352 aaPredicted RBP10.08□□□□□ -0.8
NPHP1-202ENST00000355301 SCML4Q8N228 414 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 RASGEF1CQ8N431 466 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 FBXO22Q8NEZ5 403 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 SPPL2BQ8TCT7 592 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 C2orf15Q8WU43 125 aaKnown RBP10.08□□□□□ -0.8
NPHP1-202ENST00000355301 RXFP2Q8WXD0 754 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 RIN2Q8WYP3 895 aaPredicted RBP10.08□□□□□ -0.8
NPHP1-202ENST00000355301 DPF3Q92784 378 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 MS4A14Q96JA4 679 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 RPGRIP1Q96KN7 1286 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 HERC2P3Q9BVR0 1158 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 ABI2Q9NYB9 513 aaPredicted RBP10.08□□□□□ -0.8
NPHP1-202ENST00000355301 USTQ9Y2C2 406 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 PCDHB12Q9Y5F1 795 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 CDY1Q9Y6F8 540 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 USP3Q9Y6I4 520 aa10.08□□□□□ -0.8
NPHP1-202ENST00000355301 RANBP2P49792 3224 aaKnown RBP10.08□□□□□ -0.8
NPHP1-202ENST00000355301 CTAGE15A4D2H0 777 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 EFCAB8A8MWE9 144 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 TNFRSF10BO14763 440 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 TRIM66O15016 1216 aa10.07□□□□□ -0.8
NPHP1-202ENST00000355301 CTIFO43310 598 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms