RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 ENDOD1O94919 500 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 IL1BP01584 269 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 GNAT1P11488 350 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 PTPRAP18433 802 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 PROZP22891 400 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 BMPR2Q13873 1038 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 ZCCHC23Q6ZST2 131 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 THNSL1Q8IYQ7 743 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 VPS52Q8N1B4 723 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 ARMC2Q8NEN0 867 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 MCUR1Q96AQ8 359 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 CNTN3Q9P232 1028 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 ZFATQ9P243 1243 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 CPSF3Q9UKF6 684 aaKnown RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 FAM237BA0A1B0GVD1 139 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 MEI4A8MW99 385 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 CAPN9O14815 690 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 DNAJC6O75061 913 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 OTUD4Q01804 1114 aaKnown RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 PTPN20Q4JDL3 420 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 CATSPERGQ6ZRH7 1159 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 CLNKQ7Z7G1 428 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 CCNJLQ8IV13 435 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 ACTL9Q8TC94 416 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 PTCD3Q96EY7 689 aaKnown RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 CFAP36Q96G28 342 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 ACO2Q99798 780 aaKnown RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 PTPRHQ9HD43 1115 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 MAGED2Q9UNF1 606 aaPredicted RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 SMAPO00193 183 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 CYB561D2O14569 222 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 MAFO75444 373 aaPredicted RBP10.03□□□□□ -0.8
RPE-201ENST00000354506 TMEM63AO94886 807 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 ENO1P06733 434 aaKnown RBP10.03□□□□□ -0.8
RPE-201ENST00000354506 HOXC6P09630 235 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 ETS2P15036 469 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 CD19P15391 556 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 NEK3P51956 506 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 SLC18A2Q05940 514 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 PEX6Q13608 980 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 CDO1Q16878 200 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 WASHC2DQ5SRD0 308 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 CIAPIN1Q6FI81 312 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 NPNTQ6UXI9 565 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 EEPD1Q7L9B9 569 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 IGDCC3Q8IVU1 814 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 UNC45BQ8IWX7 931 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 FAM71DQ8N9W8 422 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 ZNF280CQ8ND82 737 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 JOSD2Q8TAC2 188 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 STK32AQ8WU08 396 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 PYROXD1Q8WU10 500 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 HSPH1Q92598 858 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 PAFAH2Q99487 392 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 CALN1Q9BXU9 219 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 MTMR12Q9C0I1 747 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 NIF3L1Q9GZT8 377 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 NXF1Q9UBU9 619 aaKnown RBP10.03□□□□□ -0.8
RPE-201ENST00000354506 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.03□□□□□ -0.8
RPE-201ENST00000354506 E5RJQ4 531 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 GYG2O15488 501 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 TOM1L1O75674 476 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 TGDSO95455 350 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 AMPD1P23109 780 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 PTPN4P29074 926 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 ALDH3A1P30838 453 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 GABRB2P47870 512 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 ARL4CP56559 192 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 YWHAGP61981 247 aaKnown RBP eCLIP10.03□□□□□ -0.8
RPE-201ENST00000354506 TNFAIP1Q13829 316 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 DENND1BQ6P3S1 775 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 CYP4V2Q6ZWL3 525 aaPredicted RBP10.03□□□□□ -0.8
RPE-201ENST00000354506 NIM1KQ8IY84 436 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 ATP11CQ8NB49 1132 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 TTC13Q8NBP0 860 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 FBXO36Q8NEA4 188 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 DNERQ8NFT8 737 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 ALKBH8Q96BT7 664 aaKnown RBP10.03□□□□□ -0.8
RPE-201ENST00000354506 FAM161BQ96MY7 647 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 ACAP3Q96P50 834 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 PGLYRP2Q96PD5 576 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 CADM1Q9BY67 442 aaKnown RBP10.03□□□□□ -0.8
RPE-201ENST00000354506 RNF19AQ9NV58 838 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 NMRK1Q9NWW6 199 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 CTDP1Q9Y5B0 961 aaPredicted RBP10.03□□□□□ -0.8
RPE-201ENST00000354506 A0A0G2JMZ2 1700 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 LRRC37A2A6NM11 1700 aa10.03□□□□□ -0.8
RPE-201ENST00000354506 A6NHS1 94 aa10.02□□□□□ -0.8
RPE-201ENST00000354506 CST8O60676 142 aa10.02□□□□□ -0.8
RPE-201ENST00000354506 STK10O94804 968 aaKnown RBP10.02□□□□□ -0.8
RPE-201ENST00000354506 RAP1GAPP47736 663 aa10.02□□□□□ -0.8
RPE-201ENST00000354506 ATXN3P54252 364 aaPredicted RBP10.02□□□□□ -0.8
RPE-201ENST00000354506 THOC5Q13769 683 aaKnown RBP10.02□□□□□ -0.8
RPE-201ENST00000354506 PRKG1Q13976 671 aa10.02□□□□□ -0.8
RPE-201ENST00000354506 ACSBG2Q5FVE4 666 aa10.02□□□□□ -0.8
RPE-201ENST00000354506 RINLQ6ZS11 566 aa10.02□□□□□ -0.8
RPE-201ENST00000354506 CHSY1Q86X52 802 aa10.02□□□□□ -0.8
RPE-201ENST00000354506 PALM2Q8IXS6 379 aa10.02□□□□□ -0.8
RPE-201ENST00000354506 PDCD7Q8N8D1 485 aaKnown RBP10.02□□□□□ -0.8
RPE-201ENST00000354506 CXorf38Q8TB03 319 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms