RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 SASH1O94885 1247 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PGM3O95394 542 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TK1P04183 234 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PRKCBP05771 671 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 GNAI3P08754 354 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TGFB3P10600 412 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CYP2C8P10632 490 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PORP16435 677 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 FDXRP22570 491 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CRHR1P34998 444 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CTCFP49711 727 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 GNAI1P63096 354 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TOP3AQ13472 1001 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF792Q3KQV3 632 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TRIM68Q6AZZ1 485 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 GET4Q7L5D6 327 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PPP1R32Q7Z5V6 425 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 GATAD2AQ86YP4 633 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SYT12Q8IV01 421 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 IGDCC3Q8IVU1 814 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 IL17RDQ8NFM7 739 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 DNAJB14Q8TBM8 379 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TBC1D15Q8TC07 691 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 RADILQ96JH8 1075 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 REEP2Q9BRK0 252 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 FTOQ9C0B1 505 aaKnown RBP eCLIP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SLC25A32Q9H2D1 315 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 AGO3Q9H9G7 860 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SERHLQ9NQF3 203 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 DKK4Q9UBT3 224 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TMEM98Q9Y2Y6 226 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PCDHGB5Q9Y5G0 923 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 AGAP5A6NIR3 686 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 HNRNPDLO14979 420 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TRIM13O60858 407 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PHF2O75151 1096 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SLC43A1O75387 559 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 RECQL4O94761 1208 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ZFPL1O95159 310 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ZBTB7AO95365 584 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ADRB2P07550 413 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ANXA6P08133 673 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 FTH1P19P0C7X4 201 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TPH1P17752 444 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ATP5JP18859 108 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CSF2RBP32927 897 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 GDNFP39905 211 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 MEF2AQ02078 507 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 RNASELQ05823 741 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SLFN5Q08AF3 891 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 BECN1Q14457 450 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 MED22Q15528 200 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 RNF151Q2KHN1 245 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SLC5A9Q2M3M2 681 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TBC1D10BQ4KMP7 808 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 C19orf54Q5BKX5 351 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TTC22Q5TAA0 569 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 METTL25Q8N6Q8 603 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CCDC150Q8NCX0 1101 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 DNERQ8NFT8 737 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 GRAMD1AQ96CP6 724 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 LSM14BQ9BX40 385 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PACSIN1Q9BY11 444 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 JADE2Q9NQC1 790 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TM7SF3Q9NS93 570 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 HERC5Q9UII4 1024 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PCDHA5Q9Y5H7 936 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CACNA1AO00555 2505 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CSMD2Q7Z408 3487 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 A0A087X0M5 115 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 A0A1B0GX30 115 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 hCG_1807616A0A1W2PRN6 198 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 MATN2O00339 956 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 DAPK3O43293 454 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 PLOD3O60568 738 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 URI1O94763 535 aaPredicted RBP1.84□□□□□ -2.11
BRCA1-202ENST00000354071 GNAI2P04899 355 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 HSP90AA1P07900 732 aaKnown RBP1.84□□□□□ -2.11
BRCA1-202ENST00000354071 SLC3A2P08195 630 aaKnown RBP1.84□□□□□ -2.11
BRCA1-202ENST00000354071 CDR1P51861 262 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 ATXN1P54253 815 aaKnown RBP1.84□□□□□ -2.11
BRCA1-202ENST00000354071 TLE2Q04725 743 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 GPS1Q13098 491 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 RPS6KA2Q15349 733 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 TARBP2Q15633 366 aaKnown RBP1.84□□□□□ -2.11
BRCA1-202ENST00000354071 ADCK5Q3MIX3 580 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 CTXN3Q4LDR2 81 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 FAM69AQ5T7M9 428 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 TSHZ3Q63HK5 1081 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF772Q68DY9 489 aaPredicted RBP1.84□□□□□ -2.11
BRCA1-202ENST00000354071 MSANTD2Q6P1R3 559 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 SLC23A3Q6PIS1 610 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP1.84□□□□□ -2.11
BRCA1-202ENST00000354071 C4orf50Q6ZRC1 276 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 ZC3H18Q86VM9 953 aaKnown RBP1.84□□□□□ -2.11
BRCA1-202ENST00000354071 SNX32Q86XE0 403 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 RTKN2Q8IZC4 609 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 FLAD1Q8NFF5 587 aa1.84□□□□□ -2.11
BRCA1-202ENST00000354071 NCSTNQ92542 709 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms