RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 MAB21L3Q8N8X9 362 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 ATL2Q8NHH9 583 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 EURLQ9NYK6 297 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 TUBGCP4Q9UGJ1 667 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 HMGXB4Q9UGU5 601 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 LGALS13Q9UHV8 139 aa9.03□□□□□ -0.96
TRIM55-204ENST00000353317 DIAPH2O60879 1101 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 RALAP11233 206 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 GNAT1P11488 350 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 CCNB1P14635 433 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 CD58P19256 250 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 TAC1P20366 129 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 CCND1P24385 295 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 THPOP40225 353 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 CAV1Q03135 178 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 NFX1Q12986 1120 aaKnown RBP9.02□□□□□ -0.96
TRIM55-204ENST00000353317 MBTPS1Q14703 1052 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 WDR44Q5JSH3 913 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 TAF2Q6P1X5 1199 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 NOTUMQ6P988 496 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 TRAF7Q6Q0C0 670 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 ERICH1Q86X53 443 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 MCOLN2Q8IZK6 566 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 GRK7Q8WTQ7 553 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 CPA5Q8WXQ8 436 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 SNX27Q96L92 541 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 ZFP42Q96MM3 310 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 ZNF570Q96NI8 536 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 TWNKQ96RR1 684 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 GOLGA2P5Q9HBQ8 144 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 HMX1Q9NP08 348 aaPredicted RBP9.02□□□□□ -0.96
TRIM55-204ENST00000353317 NOP53Q9NZM5 478 aaKnown RBP9.02□□□□□ -0.96
TRIM55-204ENST00000353317 KLHL14Q9P2G3 628 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 NXF1Q9UBU9 619 aaKnown RBP9.02□□□□□ -0.96
TRIM55-204ENST00000353317 CNTN6Q9UQ52 1028 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 NME7Q9Y5B8 376 aa9.02□□□□□ -0.96
TRIM55-204ENST00000353317 A0A1W2PQ45 241 aaPredicted RBP9.02□□□□□ -0.97
TRIM55-204ENST00000353317 A0A1W2PQY0 241 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 UNC5CO95185 931 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 IL18RAPO95256 599 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 PAX7P23759 505 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 POLR2BP30876 1174 aaKnown RBP9.02□□□□□ -0.97
TRIM55-204ENST00000353317 MAN1A1P33908 653 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 WDR4P57081 412 aaKnown RBP9.02□□□□□ -0.97
TRIM55-204ENST00000353317 SLC8A3P57103 927 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 WDR72Q3MJ13 1102 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 ZNF618Q5T7W0 954 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 RNF43Q68DV7 783 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 FAM47EQ6ZV65 393 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 ANKS1BQ7Z6G8 1248 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 RNF180Q86T96 592 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 GSTCDQ8NEC7 633 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 TFAP2BQ92481 460 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 LPPQ93052 612 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 KIF12Q96FN5 646 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 PLCD4Q9BRC7 762 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 ADPGKQ9BRR6 497 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 PITPNM3Q9BZ71 974 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 ASB7Q9H672 318 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 SMYD3Q9H7B4 428 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 MIOSQ9NXC5 875 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 SAGE1Q9NXZ1 904 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 NKIRAS1Q9NYS0 192 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 ADAM22Q9P0K1 906 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 IPPQ9Y573 584 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 SCN5AQ14524 2016 aa9.02□□□□□ -0.97
TRIM55-204ENST00000353317 RASA4BC9J798 803 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 RASA4O43374 803 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 GNRH1P01148 92 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 CD52P31358 61 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 PSEN1P49768 467 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 ZNF132P52740 706 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 CDC42EP1Q00587 391 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 TMEM132DQ14C87 1099 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SGSM1Q2NKQ1 1148 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 PCSK9Q8NBP7 692 aaKnown RBP9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SLAIN1Q8ND83 568 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 MAIP1Q8WWC4 291 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 UTP4Q969X6 686 aaKnown RBP9.01□□□□□ -0.97
TRIM55-204ENST00000353317 FAXDC2Q96IV6 333 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 ANKRD36BP1Q96IX9 119 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 ETNK1Q9HBU6 452 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 CISHQ9NSE2 258 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 DPP3Q9NY33 737 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 PCDHB4Q9Y5E5 795 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 TRPV2Q9Y5S1 764 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 LAMA3Q16787 3333 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SMIM28A0A1B0GU29 152 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 PTGESO14684 152 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 HCRTO43612 131 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 TNNC2P02585 160 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 GCAP28676 217 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 CDC25CP30307 473 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 SLC1A1P43005 524 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 LPIN1Q14693 890 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 TMED2Q15363 201 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 ZNF699Q32M78 642 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 IZUMO3Q5VZ72 239 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 ZNF365Q70YC5 407 aa9.01□□□□□ -0.97
TRIM55-204ENST00000353317 RELL1Q8IUW5 271 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms