RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 RXFP2Q8WXD0 754 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 PNKPQ96T60 521 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 TRIM56Q9BRZ2 755 aaKnown RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 SIK2Q9H0K1 926 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 LHX5Q9H2C1 402 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 PALMDQ9NP74 551 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 DDX43Q9NXZ2 648 aaKnown RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 AKAP11Q9UKA4 1901 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 SIGLEC16A6NMB1 481 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 ALDH2P05091 517 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 NNMTP40261 264 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 SLC6A3Q01959 620 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 TFB1MQ8WVM0 346 aaKnown RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 TMEM169Q96HH4 297 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 PDGFCQ9NRA1 345 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 TBK1Q9UHD2 729 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 STK38LQ9Y2H1 464 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 SHANK3Q9BYB0 1731 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 CA12O43570 354 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 TMEM139Q8IV31 216 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 RYBPQ8N488 228 aaPredicted RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 PPHLN1Q8NEY8 458 aaKnown RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 FAM172AQ8WUF8 416 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 NAT9Q9BTE0 207 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 THEGQ9P2T0 379 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 M0QYT0 321 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 PMLP29590 882 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 OVOS1Q6IE37 1185 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 TIGD7Q6NT04 549 aaPredicted RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 ZC3H3Q8IXZ2 948 aaKnown RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 LNX1Q8TBB1 728 aaPredicted RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 NFKBIZQ9BYH8 718 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 WDCPQ9H6R7 721 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 RAB6BQ9NRW1 208 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 KRT82Q9NSB4 513 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 CHCHD3Q9NX63 227 aaKnown RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 XPO7Q9UIA9 1087 aaKnown RBP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 PCDHB8Q9UN66 801 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 POLIQ9UNA4 740 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMAD9-201ENST00000350148 COQ4Q9Y3A0 265 aa12.66□□□□□ -0.38
SMAD9-201ENST00000350148 CACNA1SQ13698 1873 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 IFNAR2P48551 515 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 NR2C2P49116 596 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 IRX4P78413 519 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 DRP2Q13474 957 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 SERPINB12Q96P63 405 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 KIF9Q9HAQ2 790 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 PRDM5Q9NQX1 630 aaPredicted RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 KLHL11Q9NVR0 708 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 EPHB6O15197 1021 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 TLR2O60603 784 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 ATG7O95352 703 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 MOCS2O96007 188 aaPredicted RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 C4BPAP04003 597 aaKnown RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 CYP2C18P33260 490 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 HSPA9P38646 679 aaKnown RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 CARSP49589 748 aaKnown RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 ITGA8P53708 1063 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 JAM2P57087 298 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 BEX3Q00994 111 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 MGAT5BQ3V5L5 792 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 MFSD4BQ5TF39 518 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 CXorf38Q8TB03 319 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 BSNDQ8WZ55 320 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 HSD3B7Q9H2F3 369 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 PSMC3IPQ9P2W1 217 aaPredicted RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 CDH9Q9ULB4 789 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 MKL2Q9ULH7 1088 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 COL5A3P25940 1745 aaPredicted RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 HNRNPCP07910 306 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 RARGP13631 454 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 MAGEA4P43358 317 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 FMO1Q01740 532 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 PLD1Q13393 1074 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 SDCCAG8Q86SQ7 713 aaPredicted RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 CASKIN2Q8WXE0 1202 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 BRI3BPQ8WY22 251 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 DTNBP1Q96EV8 351 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 FUT8Q9BYC5 575 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 PCDHB5Q9Y5E4 795 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 ARHGAP42A6NI28 874 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 ADAMTS3O15072 1205 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 DCTN3O75935 186 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 ANXA9O76027 345 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 BRAFP15056 766 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 YWHAHQ04917 246 aaPredicted RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 PDCLQ13371 301 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 CTXN3Q4LDR2 81 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 BEND6Q5SZJ8 279 aaPredicted RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 NAPEPLDQ6IQ20 393 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 APBB2Q92870 758 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 PABPC3Q9H361 631 aaKnown RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 PCDH9Q9HC56 1237 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 DMAP1Q9NPF5 467 aaPredicted RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 XPNPEP1Q9NQW7 623 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 TXLNGQ9NUQ3 528 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 DNAJC17Q9NVM6 304 aaKnown RBP12.65□□□□□ -0.38
SMAD9-201ENST00000350148 PSD3Q9NYI0 1048 aa12.65□□□□□ -0.38
SMAD9-201ENST00000350148 PTCH2Q9Y6C5 1203 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms