RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 SEPT1Q8WYJ6 367 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 INPP5DQ92835 1189 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 CADM1Q9BY67 442 aaKnown RBP18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 STRIP2Q9ULQ0 834 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 CXorf49A8MYA2 514 aaPredicted RBP18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 E5RJQ4 531 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 MICAL2O94851 1124 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 CLCN3P51790 818 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 EFNA5P52803 228 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 CDH6P55285 790 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 SLC8A3P57103 927 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 KLHL38Q2WGJ6 581 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 FYB2Q5VWT5 728 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 STK32AQ8WU08 396 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 CFAP36Q96G28 342 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 MECRQ9BV79 373 aa18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.9■□□□□ 0.62
PTP4A3-202ENST00000349124 APOC4-APOC2K7ER74 178 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 UGT1A9O60656 530 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 TNNC2P02585 160 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 APOC2P02655 101 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 FAM102AQ5T9C2 384 aaPredicted RBP18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 ATF7IP2Q5U623 682 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 MAP1SQ66K74 1059 aaPredicted RBP18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 TTC13Q8NBP0 860 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 KLRG1Q96E93 195 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 TSSK1BQ9BXA7 367 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 UGT1A7Q9HAW7 530 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 UGT1A10Q9HAW8 530 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 UGT1A8Q9HAW9 530 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 PIM2Q9P1W9 311 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 ARMCX1Q9P291 453 aa18.89■□□□□ 0.62
PTP4A3-202ENST00000349124 KAT6AQ92794 2004 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 C19orf81C9J6K1 198 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 M0QYV0 167 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 GPR25O00155 361 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 MCF2LO15068 1137 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 ITGB3P05106 788 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 PGK2P07205 417 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 TROVE2P10155 538 aaKnown RBP eCLIP18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 PTPN4P29074 926 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 ETV4P43268 484 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 SESN3P58005 492 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 SH2D5Q6ZV89 423 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 NCAPG2Q86XI2 1143 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 COPS5Q92905 334 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 ANKRD36BP1Q96IX9 119 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 CYTH2Q99418 400 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 VPS33BQ9H267 617 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 LHX5Q9H2C1 402 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 PTPRHQ9HD43 1115 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 EFR3BQ9Y2G0 817 aa18.89■□□□□ 0.61
PTP4A3-202ENST00000349124 RGPD3A6NKT7 1758 aaPredicted RBP18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 RGPD4Q7Z3J3 1758 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 FAM237BA0A1B0GVD1 139 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 H7C0C1 242 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 ATP5OP48047 213 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 ERFP50548 548 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 ZNF667Q5HYK9 610 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 IER5Q5VY09 327 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 CYP4V2Q6ZWL3 525 aaPredicted RBP18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 CTAGE3PQ8IX95 158 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 DNERQ8NFT8 737 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 MICAL1Q8TDZ2 1067 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 NAF1Q96HR8 494 aaKnown RBP18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 MAGEB5Q9BZ81 275 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 VPS11Q9H270 941 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 RAB6BQ9NRW1 208 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 WFS1O76024 890 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 RNF8O76064 485 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 ZNF200P98182 395 aaPredicted RBP18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 CDCA2Q69YH5 1023 aaPredicted RBP18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 MPZL3Q6UWV2 235 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 APBB1IPQ7Z5R6 666 aaPredicted RBP18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 ZBTB8OSQ8IWT0 167 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 PPM1NQ8N819 430 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 FAF2Q96CS3 445 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 HEXIM2Q96MH2 286 aaKnown RBP18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 TMEM120AQ9BXJ8 343 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 SSU72Q9NP77 194 aaKnown RBP18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 HEY1Q9Y5J3 304 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 TEX264Q9Y6I9 313 aa18.88■□□□□ 0.61
PTP4A3-202ENST00000349124 LACTBL1A8MY62 500 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 GPD2P43304 727 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 ARFIP2P53365 341 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 PTPN11Q06124 597 aaPredicted RBP18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 GRM1Q13255 1194 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 ZC3H12AQ5D1E8 599 aaKnown RBP18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 FAM160B1Q5W0V3 765 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 CES4AQ5XG92 561 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 SCYL2Q6P3W7 929 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 RFX8Q6ZV50 586 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 PAXIP1Q6ZW49 1069 aaPredicted RBP18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 C12orf29Q8N999 325 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 FAXDC2Q96IV6 333 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 ADPGKQ9BRR6 497 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 TRIM55Q9BYV6 548 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 CDT1Q9H211 546 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 CYP3A5P20815 502 aa18.87■□□□□ 0.61
PTP4A3-202ENST00000349124 CPA2P48052 419 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms