RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 APOL1O14791 398 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 TTC4O95801 387 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 USP17L7P0C7H9 530 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 RARGP13631 454 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 EIF4BP23588 611 aaKnown RBP13.89□□□□□ -0.19
CASC4-202ENST00000345795 AFF1P51825 1210 aaKnown RBP13.89□□□□□ -0.19
CASC4-202ENST00000345795 CENPCQ03188 943 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 ZCCHC23Q6ZST2 131 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 DDX1Q92499 740 aaKnown RBP13.89□□□□□ -0.19
CASC4-202ENST00000345795 VPS33BQ9H267 617 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 KRT82Q9NSB4 513 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 SLC17A6Q9P2U8 582 aa13.89□□□□□ -0.19
CASC4-202ENST00000345795 ZC3H7BQ9UGR2 993 aaKnown RBP13.89□□□□□ -0.19
CASC4-202ENST00000345795 AP1G2O75843 785 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 SUN1O94901 812 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 ANXA13P27216 316 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 SOX11P35716 441 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 TMPRSS15P98073 1019 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 MFSD10Q14728 455 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 LVRNQ6Q4G3 990 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 ZDHHC24Q6UX98 284 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 SLFN11Q7Z7L1 901 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 ERLEC1Q96DZ1 483 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 DDX27Q96GQ7 796 aaKnown RBP13.88□□□□□ -0.19
CASC4-202ENST00000345795 SCYL1Q96KG9 808 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 ABHD16BQ9H3Z7 469 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 GRHL1Q9NZI5 618 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 PGAP2Q9UHJ9 254 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 TRPA1O75762 1119 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 IGFBP6P24592 240 aaPredicted RBP13.88□□□□□ -0.19
CASC4-202ENST00000345795 BRCC3P46736 316 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 RAD23BP54727 409 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 CA9Q16790 459 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 KDM7AQ6ZMT4 941 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 ADGRF2Q8IZF7 708 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 KCTD17Q8N5Z5 321 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 SGF29Q96ES7 293 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 CNTRLQ7Z7A1 2325 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 TCRBV7S3A2A0A539 114 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 MEFVO15553 781 aaPredicted RBP13.88□□□□□ -0.19
CASC4-202ENST00000345795 GRIK1P39086 918 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 AUHQ13825 339 aaKnown RBP13.88□□□□□ -0.19
CASC4-202ENST00000345795 NXNQ6DKJ4 435 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 DEFB106AQ8N104 65 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 KCNK16Q96T55 309 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 CD248Q9HCU0 757 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 CYTH4Q9UIA0 394 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 MFHAS1Q9Y4C4 1052 aa13.88□□□□□ -0.19
CASC4-202ENST00000345795 COL5A3P25940 1745 aaPredicted RBP13.88□□□□□ -0.19
CASC4-202ENST00000345795 EPHB2P29323 1055 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 ETFBP38117 255 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 FNTAP49354 379 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 GBE1Q04446 702 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 DEUP1Q05D60 604 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 CFAP157Q5JU67 520 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 C4orf50Q6ZRC1 276 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 DDX43Q9NXZ2 648 aaKnown RBP13.87□□□□□ -0.19
CASC4-202ENST00000345795 SIX4Q9UIU6 781 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 BARX2Q9UMQ3 279 aaPredicted RBP13.87□□□□□ -0.19
CASC4-202ENST00000345795 A0A087WUV0 522 aaPredicted RBP13.87□□□□□ -0.19
CASC4-202ENST00000345795 GLTPD2A6NH11 291 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 C22orf31O95567 290 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 FAM107AO95990 144 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 C1QBPQ07021 282 aaKnown RBP13.87□□□□□ -0.19
CASC4-202ENST00000345795 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 ILDR2Q71H61 639 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 TFAP2DQ7Z6R9 452 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 EXOC3L1Q86VI1 746 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 EXD1Q8NHP7 514 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 B3GALT6Q96L58 329 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 ZMAT2Q96NC0 199 aaKnown RBP13.87□□□□□ -0.19
CASC4-202ENST00000345795 ETNK1Q9HBU6 452 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 UBN1Q9NPG3 1134 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 ABCF3Q9NUQ8 709 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 ZNF112Q9UJU3 913 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 TMEM191CA6NGB0 347 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 LPXNO60711 386 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 CDH16O75309 829 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 BDNFP23560 247 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 PGGT1BP53609 377 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 FYB2Q5VWT5 728 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 DPY19L2P1Q6NXN4 242 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 VPS52Q8N1B4 723 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 PDCD7Q8N8D1 485 aaKnown RBP13.87□□□□□ -0.19
CASC4-202ENST00000345795 SLC4A11Q8NBS3 891 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 KAT2BQ92831 832 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 ERP27Q96DN0 273 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 TMEM237Q96Q45 408 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 CNTNAP2Q9UHC6 1331 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 UBR3Q6ZT12 1888 aa13.87□□□□□ -0.19
CASC4-202ENST00000345795 C17orf102A2RUQ5 167 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 KPNA7A9QM74 516 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 KBTBD13C9JR72 458 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 STK10O94804 968 aaKnown RBP13.86□□□□□ -0.19
CASC4-202ENST00000345795 GOT1P17174 413 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 GMPRP36959 345 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 ZNF677Q86XU0 584 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 C12orf56Q8IXR9 622 aa13.86□□□□□ -0.19
CASC4-202ENST00000345795 ZC3H3Q8IXZ2 948 aaKnown RBP13.86□□□□□ -0.19
CASC4-202ENST00000345795 ARMC2Q8NEN0 867 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms