RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 GSC2O15499 205 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 FARP2O94887 1054 aaPredicted RBP24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 TRUB2O95900 331 aaKnown RBP24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 IL1BP01584 269 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 PRKCBP05771 671 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 INHBAP08476 426 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 ACADSP16219 412 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 RXRBP28702 533 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 ROR1Q01973 937 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 CNTN2Q02246 1040 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 SURF1Q15526 300 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 PEBP4Q96S96 227 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 TNS1Q9HBL0 1735 aaKnown RBP24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 WDR35Q9P2L0 1181 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 IKBKGQ9Y6K9 419 aa24.13■■□□□ 1.45
NKX2-3-201ENST00000344586 CCDC189A1A4V9 331 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 C2orf71A6NGG8 1288 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 PCK1P35558 622 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 SYCP2LQ5T4T6 812 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 RINLQ6ZS11 566 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 SYNCQ9H7C4 482 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 USP18Q9UMW8 372 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 TNNC2P02585 160 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 C1QAP02745 245 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 YWHAGP61981 247 aaKnown RBP eCLIP24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 MMRN1Q13201 1228 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 KRT72Q14CN4 511 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 NOMO1Q15155 1222 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 CATSPERGQ6ZRH7 1159 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 APBB1IPQ7Z5R6 666 aaPredicted RBP24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 CFAP61Q8NHU2 1237 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 DNAJC9Q8WXX5 260 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 SDCBP2Q9H190 292 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 RSAD1Q9HA92 442 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 PICK1Q9NRD5 415 aa24.12■■□□□ 1.45
NKX2-3-201ENST00000344586 GYG2O15488 501 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 LINGO3P0C6S8 592 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 SRGAP2CP0DJJ0 459 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 SERPINB4P48594 390 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 STAT5BP51692 787 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 ZBTB16Q05516 673 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 LAMTOR4Q0VGL1 99 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 DARS2Q6PI48 645 aaKnown RBP24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 PRPF39Q86UA1 669 aaKnown RBP24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 DNERQ8NFT8 737 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 WRNIP1Q96S55 665 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 BCO2Q9BYV7 579 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 HMGXB4Q9UGU5 601 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 HACL1Q9UJ83 578 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 ZNF112Q9UJU3 913 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 FZD1Q9UP38 647 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 SPDYE16A6NNV3 312 aaPredicted RBP24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 AVILO75366 819 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 CCNHP51946 323 aaPredicted RBP24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 CDH8P55286 799 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 KPNB1Q14974 876 aaKnown RBP24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 TSNAXIP1Q2TAA8 658 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 FAM182AQ5T1J6 154 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 TTC7BQ86TV6 843 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 ZC3H18Q86VM9 953 aaKnown RBP24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 MCRS1Q96EZ8 462 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 TWNKQ96RR1 684 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 NMRK1Q9NWW6 199 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 TTLL3Q9Y4R7 772 aa24.11■■□□□ 1.45
NKX2-3-201ENST00000344586 E5RJQ4 531 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 B4GALT4O60513 344 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 SPAG6O75602 509 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 FAM155BO75949 473 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 PROZP22891 400 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 GCKP35557 465 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 OSTNP61366 133 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 GRIK3Q13003 919 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 RCN1Q15293 331 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 ACSBG2Q5FVE4 666 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 SMYD5Q6GMV2 418 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 CYP4V2Q6ZWL3 525 aaPredicted RBP24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 LMNTD2Q8IXW0 634 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 TMEM130Q8N3G9 435 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 RNF149Q8NC42 400 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 ANKRD36BP1Q96IX9 119 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 ZNF333Q96JL9 665 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 PNPLA8Q9NP80 782 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 STOML1Q9UBI4 398 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 AFG3L2Q9Y4W6 797 aa24.1■■□□□ 1.45
NKX2-3-201ENST00000344586 KLF11O14901 512 aa24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 CHADO15335 359 aa24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 KRT36O76013 467 aa24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 RNF8O76064 485 aa24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 MYL2P10916 166 aa24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 NEFHP12036 1026 aa24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 STIP1P31948 543 aaKnown RBP24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 YWHAZP63104 245 aaKnown RBP24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 FAM160B1Q5W0V3 765 aa24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 DCAF15Q66K64 600 aa24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 CDHR3Q6ZTQ4 885 aa24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 CEP120Q8N960 986 aa24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 CFAP36Q96G28 342 aa24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 OXNAD1Q96HP4 312 aaPredicted RBP24.09■■□□□ 1.45
NKX2-3-201ENST00000344586 SRPK1Q96SB4 655 aaKnown RBP24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms