RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 RABGAP1LQ5R372 815 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 TTC39BQ5VTQ0 682 aaPredicted RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 TXNRD3NBQ6F5E7 133 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 BBS12Q6ZW61 710 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 PASD1Q8IV76 773 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 IGDCC3Q8IVU1 814 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 GPD1LQ8N335 351 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 MARVELD2Q8N4S9 558 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 TTC13Q8NBP0 860 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 SPIRE2Q8WWL2 714 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 ZNF516Q92618 1163 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 PPP1R14BQ96C90 147 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 HAUS1Q96CS2 278 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 MPP4Q96JB8 637 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 IDI2Q9BXS1 227 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 ZNF510Q9Y2H8 683 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 TEX264Q9Y6I9 313 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 BTAF1O14981 1849 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 ARID2Q68CP9 1835 aa10.08□□□□□ -0.8
HOXA1-201ENST00000343060 ASTN2O75129 1339 aaPredicted RBP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 SF3B1O75533 1304 aaKnown RBP eCLIP10.08□□□□□ -0.8
HOXA1-201ENST00000343060 C15orf38-AP3S2A0A0A6YYH1 394 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 DENRO43583 198 aaKnown RBP10.07□□□□□ -0.8
HOXA1-201ENST00000343060 OR6B1O95007 311 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 HLA-DRAP01903 254 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 PEX2P28328 305 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 GNA15P30679 374 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 YWHABP31946 246 aaKnown RBP10.07□□□□□ -0.8
HOXA1-201ENST00000343060 L1CAMP32004 1257 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 OTUD4Q01804 1114 aaKnown RBP10.07□□□□□ -0.8
HOXA1-201ENST00000343060 OGDHQ02218 1023 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 SPP2Q13103 211 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 SNAPC2Q13487 334 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 ABCB5Q2M3G0 1257 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 MDH1BQ5I0G3 518 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 B3GNT6Q6ZMB0 384 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 ARPINQ7Z6K5 226 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 SLC26A11Q86WA9 606 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 C4orf19Q8IY42 314 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 SLC25A41Q8N5S1 370 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 SHKBP1Q8TBC3 707 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 ACTL9Q8TC94 416 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 GDPD5Q8WTR4 605 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 NLRP4Q96MN2 994 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 ZDHHC15Q96MV8 337 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 ACAP3Q96P50 834 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 FAM198AQ9UFP1 575 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 XPO7Q9UIA9 1087 aaKnown RBP10.07□□□□□ -0.8
HOXA1-201ENST00000343060 ITGA11Q9UKX5 1188 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 CHMP2BQ9UQN3 213 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 SPDYE2BA6NHP3 402 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 KBTBD13C9JR72 458 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 F8VP50 259 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 BIRC5O15392 142 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 CALB1P05937 261 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 SPDYE6P0CI01 402 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 ELK3P41970 407 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 RPL5P46777 297 aaKnown RBP10.07□□□□□ -0.8
HOXA1-201ENST00000343060 NPTX2P47972 431 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 SCNN1DP51172 638 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 STAT2P52630 851 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 ZNF132P52740 706 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 AQP5P55064 265 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 IRX4P78413 519 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 TMPRSS15P98073 1019 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 CREB5Q02930 508 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 TAP1Q03518 808 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 CUL2Q13617 745 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 PIGHQ14442 188 aaPredicted RBP10.07□□□□□ -0.8
HOXA1-201ENST00000343060 SPDYE2Q495Y8 402 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 BRDTQ58F21 947 aaPredicted RBP10.07□□□□□ -0.8
HOXA1-201ENST00000343060 WDR44Q5JSH3 913 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 OGFRL1Q5TC84 451 aaPredicted RBP10.07□□□□□ -0.8
HOXA1-201ENST00000343060 KLC3Q6P597 504 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 FBXL19Q6PCT2 694 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 CRLF3Q8IUI8 442 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 SAMD3Q8N6K7 520 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 ACTRT2Q8TDY3 377 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 PYDC1Q8WXC3 89 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 NTPCRQ9BSD7 190 aaKnown RBP10.07□□□□□ -0.8
HOXA1-201ENST00000343060 USP29Q9HBJ7 922 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 MRPL11Q9Y3B7 192 aaKnown RBP10.07□□□□□ -0.8
HOXA1-201ENST00000343060 TTLL3Q9Y4R7 772 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 IKBKGQ9Y6K9 419 aa10.07□□□□□ -0.8
HOXA1-201ENST00000343060 TTC36A6NLP5 189 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 TRIM49D1C9J1S8 452 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 H3BNX3 289 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 DDX39AO00148 427 aaKnown RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 C4BPAP04003 597 aaKnown RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 TFAP2AP05549 437 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 C6orf222P0C671 652 aaPredicted RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 PSMD6Q15008 389 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 CHI3L2Q15782 390 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 USP41Q3LFD5 358 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 MMEL1Q495T6 779 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 TDRD10Q5VZ19 366 aaKnown RBP10.06□□□□□ -0.8
HOXA1-201ENST00000343060 LPCAT4Q643R3 524 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 ARCQ7LC44 396 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 UBR7Q8N806 425 aa10.06□□□□□ -0.8
HOXA1-201ENST00000343060 MAML3Q96JK9 1138 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 591.5 ms