RNA–Protein interactions for RNA: ENST00000342887.1

CFAP54-201, Transcript of cilia and flagella associated protein 54, humanhuman

TSL 2

Gene CFAP54, Length 3,686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54-201ENST00000342887 KIF3CO14782 793 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 CHUKO15111 745 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 TJP3O95049 919 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 WISP3O95389 354 aaPredicted RBP8.5□□□□□ -1.05
CFAP54-201ENST00000342887 ETS1P14921 441 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 POLGP54098 1239 aaPredicted RBP8.5□□□□□ -1.05
CFAP54-201ENST00000342887 IFT88Q13099 833 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 SLC45A4Q5BKX6 768 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 RAB41Q5JT25 222 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 ZNF484Q5JVG2 852 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 KCTD11Q693B1 232 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 NCAPG2Q86XI2 1143 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 TMEM130Q8N3G9 435 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 SNX27Q96L92 541 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 SIGLEC10Q96LC7 697 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 MIPEPQ99797 713 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 FRMD8Q9BZ67 464 aaPredicted RBP8.5□□□□□ -1.05
CFAP54-201ENST00000342887 SAR1AQ9NR31 198 aa8.5□□□□□ -1.05
CFAP54-201ENST00000342887 FAM47DPA6NHR8 397 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 C9IYK1 514 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 MICAL2O94851 1124 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 SUN1O94901 812 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 UBOX5O94941 541 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ATP5BP06576 529 aaKnown RBP8.49□□□□□ -1.05
CFAP54-201ENST00000342887 SETSIPP0DME0 302 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ATP5DP30049 168 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 LIG4P49917 911 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 STAT5BP51692 787 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 GJA9P57773 515 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 HLTFQ14527 1009 aaKnown RBP eCLIP8.49□□□□□ -1.05
CFAP54-201ENST00000342887 MAPK6Q16659 721 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 TMEM270Q6UE05 265 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 RUFY1Q96T51 708 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ZNF670Q9BS34 389 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ASNSD1Q9NWL6 643 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 PLXNB3Q9ULL4 1909 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 B4GALT5O43286 388 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 PEX11AO75192 247 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ZWINTO95229 277 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 IGLV3-25P01717 112 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 NFICP08651 508 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ZSCAN5DPP0CG00 497 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 TGM2P21980 687 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 OCRLQ01968 901 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 SCAPQ12770 1279 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 SEMA5AQ13591 1074 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ARHGEF18Q6ZSZ5 1173 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 CLEC14AQ86T13 490 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 UNC45BQ8IWX7 931 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ARNTL2Q8WYA1 636 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 PTPRN2Q92932 1015 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 CCDC127Q96BQ5 260 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 SLC2A13Q96QE2 648 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 RBM15Q96T37 977 aaKnown RBP eCLIP8.49□□□□□ -1.05
CFAP54-201ENST00000342887 PLVAPQ9BX97 442 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 KLC2Q9H0B6 622 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 MRM3Q9HC36 420 aaKnown RBP8.49□□□□□ -1.05
CFAP54-201ENST00000342887 PPANQ9NQ55 473 aaKnown RBP8.49□□□□□ -1.05
CFAP54-201ENST00000342887 RCOR3Q9P2K3 495 aaPredicted RBP8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ANAPC5Q9UJX4 755 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 EMCNQ9ULC0 261 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 G3V3G9 751 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 K7ERI5 159 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 GABRDO14764 452 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ATF2P15336 505 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 KCNE1P15382 129 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 IKQ13123 557 aaPredicted RBP8.49□□□□□ -1.05
CFAP54-201ENST00000342887 PKN2Q16513 984 aaKnown RBP8.49□□□□□ -1.05
CFAP54-201ENST00000342887 DUOXA2Q1HG44 320 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 RABGAP1LQ5R372 815 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 UBXN11Q5T124 520 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 DCAF8Q5TAQ9 597 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 SPATA21Q7Z572 469 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 TTC30AQ86WT1 665 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ZDHHC17Q8IUH5 632 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 CCDC105Q8IYK2 499 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 LRRC39Q96DD0 335 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 C11orf70Q9BRQ4 267 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 ASCC2Q9H1I8 757 aaPredicted RBP8.49□□□□□ -1.05
CFAP54-201ENST00000342887 INTS9Q9NV88 658 aaKnown RBP8.49□□□□□ -1.05
CFAP54-201ENST00000342887 DDX43Q9NXZ2 648 aaKnown RBP8.49□□□□□ -1.05
CFAP54-201ENST00000342887 CAPN7Q9Y6W3 813 aa8.49□□□□□ -1.05
CFAP54-201ENST00000342887 PTPRSQ13332 1948 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 A6NHS1 94 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 PRKCBP05771 671 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 KRT16P08779 473 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 VDRP11473 427 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 MYCLP12524 364 aaPredicted RBP8.48□□□□□ -1.05
CFAP54-201ENST00000342887 PSMA3P25788 255 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 YWHAZP63104 245 aaKnown RBP8.48□□□□□ -1.05
CFAP54-201ENST00000342887 SLC10A2Q12908 348 aaPredicted RBP8.48□□□□□ -1.05
CFAP54-201ENST00000342887 GRB14Q14449 540 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 LIN9Q5TKA1 542 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 PPP1R21Q6ZMI0 780 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 MAEAQ7L5Y9 396 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 CCDC50Q8IVM0 306 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 ZNF778Q96MU6 729 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 C7orf26Q96N11 449 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 MCEEQ96PE7 176 aa8.48□□□□□ -1.05
CFAP54-201ENST00000342887 QKIQ96PU8 341 aaKnown RBP eCLIP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms