RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SLITRK1Q96PX8 696 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 ZNRF3Q9ULT6 936 aa12.92□□□□□ -0.34
SNRNP48-201ENST00000342415 OGTO15294 1046 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 TPST1O60507 370 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 USP12O75317 370 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 MOCS2O96007 188 aaPredicted RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 STIP1P31948 543 aaKnown RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 NUDT2P50583 147 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 PAPOLAP51003 745 aaKnown RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 ACAD11Q709F0 780 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 TEX2Q8IWB9 1127 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 SCUBE3Q8IX30 993 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 FAM172AQ8WUF8 416 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 OXNAD1Q96HP4 312 aaPredicted RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 TASP1Q9H6P5 420 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 DISP2A7MBM2 1401 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 C5P01031 1676 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 GJB1P08034 283 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 RBL1P28749 1068 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 SLC25A3Q00325 362 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 PDK4Q16654 411 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 SPDYCQ5MJ68 293 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 DENND1BQ6P3S1 775 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 FOXR2Q6PJQ5 311 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 UNC45BQ8IWX7 931 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 CGRRF1Q99675 332 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 AVENQ9NQS1 362 aaPredicted RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 COL20A1Q9P218 1284 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 WDR35Q9P2L0 1181 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 SLC39A10Q9ULF5 831 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 GRID1Q9ULK0 1009 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 RNF103-CHMP3A0A140T963 221 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 PEX10O60683 326 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 EDF1O60869 148 aaKnown RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 COPAP53621 1224 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 WDR4P57081 412 aaKnown RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 STX1BP61266 288 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 SNRPFP62306 86 aaKnown RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 NOMO3P69849 1222 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 MRPS9P82933 396 aaKnown RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 KATNAL2Q8IYT4 538 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 CNBD2Q96M20 576 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 C17orf75Q9HAS0 396 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 C20orf96Q9NUD7 363 aaPredicted RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 ARL8BQ9NVJ2 186 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 NOCTQ9UK39 431 aaKnown RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 RGPD5Q99666 1765 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 DUOX1Q9NRD9 1551 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 XPO1O14980 1071 aaKnown RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 TCF4P15884 667 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 MUTP22033 750 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 HOXA10P31260 410 aaPredicted RBP12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 SLC34A1Q06495 639 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 MCL1Q07820 350 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 GOLGA7BQ2TAP0 167 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 DEFB132Q7Z7B7 95 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 CPB2Q96IY4 423 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 NACA2Q9H009 215 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 IL1RL2Q9HB29 575 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 MYOZ2Q9NPC6 264 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 ACSS2Q9NR19 701 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 AURKCQ9UQB9 309 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 STARD13Q9Y3M8 1113 aa12.91□□□□□ -0.34
SNRNP48-201ENST00000342415 KPNA7A9QM74 516 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 PPP1R12AO14974 1030 aaPredicted RBP12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 ZC3H11AO75152 810 aaKnown RBP eCLIP12.9□□□□□ -0.341e-6■□□□□ 9.4
SNRNP48-201ENST00000342415 SUPT3HO75486 399 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 CCNE2O96020 404 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 AVPR1AP37288 418 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 CCNHP51946 323 aaPredicted RBP12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 JAG1P78504 1218 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 ITGA9Q13797 1035 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 TMEM132DQ14C87 1099 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 PDCD2Q16342 344 aaPredicted RBP12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 ANGEL2Q5VTE6 544 aaKnown RBP12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 ZNF772Q68DY9 489 aaPredicted RBP12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 DEFB107AQ8IZN7 70 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 OR6P1Q8NGX9 317 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 USP6NLQ92738 828 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 NT5C1AQ9BXI3 368 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 DENND2DQ9H6A0 471 aaPredicted RBP12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 CST3P01034 146 aaPredicted RBP12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 PROCP04070 461 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 SUPT20HL2P0C7V6 817 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 MSX2P35548 267 aaPredicted RBP12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 DSG1Q02413 1049 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 CACNB2Q08289 660 aaPredicted RBP12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 MPP2Q14168 576 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 RNF43Q68DV7 783 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 JOSD2Q8TAC2 188 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 USP13Q92995 863 aaPredicted RBP12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 MRPL46Q9H2W6 279 aaKnown RBP12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 KLK14Q9P0G3 267 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 CHKBQ9Y259 395 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 MAGEA13PA6NCF6 341 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 ETS2P15036 469 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 ATP4AP20648 1035 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 DPYSL3Q14195 570 aa12.9□□□□□ -0.34
SNRNP48-201ENST00000342415 ASAP3Q8TDY4 903 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms