RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 EPB41P11171 864 aaKnown RBP21.39■■□□□ 1.01
SYNE2-201ENST00000341472 TCF3P15923 654 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 SLC7A9P82251 487 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 SATB1Q01826 763 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 IFRD2Q12894 506 aaPredicted RBP21.39■■□□□ 1.01
SYNE2-201ENST00000341472 NR1H3Q13133 447 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 ORC1Q13415 861 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 CCINQ13939 588 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 WDR44Q5JSH3 913 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 KRT39Q6A163 491 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 SPATA20Q8TB22 786 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 EXOC4Q96A65 974 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 RNF38Q9H0F5 515 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 LINC00597Q9H2U6 94 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 ECT2Q9H8V3 914 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 APOBEC3GQ9HC16 384 aaKnown RBP21.39■■□□□ 1.01
SYNE2-201ENST00000341472 DMAP1Q9NPF5 467 aaPredicted RBP21.39■■□□□ 1.01
SYNE2-201ENST00000341472 COMMD8Q9NX08 183 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 CHORDC1Q9UHD1 332 aaPredicted RBP21.39■■□□□ 1.01
SYNE2-201ENST00000341472 WNT6Q9Y6F9 365 aa21.39■■□□□ 1.01
SYNE2-201ENST00000341472 MYO15AQ9UKN7 3530 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 GVINP1Q7Z2Y8 2422 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 GPR179Q6PRD1 2367 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 LEFTY2O00292 366 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 GALK1P51570 392 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 USP4Q13107 963 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 COBLL1Q53SF7 1204 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 TMEM196Q5HYL7 178 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 Q6ZS52 159 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 C12orf29Q8N999 325 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 PDZD8Q8NEN9 1154 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 SCAMP5Q8TAC9 235 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 SLC2A14Q8TDB8 520 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 ERCC4Q92889 916 aaPredicted RBP21.38■■□□□ 1.01
SYNE2-201ENST00000341472 ATP2A3Q93084 1043 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 FBXO32Q969P5 355 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 DNAI2Q9GZS0 605 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 IL37Q9NZH6 218 aa21.38■■□□□ 1.01
SYNE2-201ENST00000341472 TNFRSF10BO14763 440 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 LILRB5O75023 590 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 TDGF1P13385 188 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 CCDC130P13994 396 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 GJA4P35212 333 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 FKBP3Q00688 224 aaKnown RBP21.37■■□□□ 1.01
SYNE2-201ENST00000341472 EML3Q32P44 896 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 ANKRD40Q6AI12 368 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 ELOA2Q8IYF1 753 aaPredicted RBP21.37■■□□□ 1.01
SYNE2-201ENST00000341472 SUMF1Q8NBK3 374 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 OVCA2Q8WZ82 227 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 NT5C1AQ9BXI3 368 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 NIF3L1Q9GZT8 377 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 KRT82Q9NSB4 513 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 HMGXB4Q9UGU5 601 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 DMDP11532 3685 aa21.37■■□□□ 1.01
SYNE2-201ENST00000341472 ZXDBP98169 803 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 INCA1Q0VD86 236 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 FSTL4Q6MZW2 842 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 KIAA1958Q8N8K9 716 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 RUBCNQ92622 972 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 HNRNPABQ99729 332 aaKnown RBP21.36■■□□□ 1.01
SYNE2-201ENST00000341472 SMOQ99835 787 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 P2RY13Q9BPV8 354 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 FBRSL1Q9HCM7 1045 aaKnown RBP21.36■■□□□ 1.01
SYNE2-201ENST00000341472 FAM49BQ9NUQ9 324 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 RAB20Q9NX57 234 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 SMPD4Q9NXE4 827 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 CPQQ9Y646 472 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 VPS13AQ96RL7 3174 aa21.36■■□□□ 1.01
SYNE2-201ENST00000341472 OLFM2O95897 454 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 OAS1P00973 400 aaKnown RBP21.35■■□□□ 1.01
SYNE2-201ENST00000341472 CD58P19256 250 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 DRD1P21728 446 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 MXI1P50539 228 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 SLC5A3P53794 718 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 MAP3K7CLP57077 242 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 STIM1Q13586 685 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 HECTD3Q5T447 861 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 FBXL13Q8NEE6 735 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 ZMIZ2Q8NF64 920 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 SEMA4DQ92854 862 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 CHFRQ96EP1 664 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 CYFIP2Q96F07 1278 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 FAXDC2Q96IV6 333 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 TWNKQ96RR1 684 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 HINFPQ9BQA5 517 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 CSNK1G1Q9HCP0 422 aa21.35■■□□□ 1.01
SYNE2-201ENST00000341472 WDR87Q6ZQQ6 2873 aa21.34■■□□□ 1.01
SYNE2-201ENST00000341472 SLC9A3R1O14745 358 aaPredicted RBP21.34■■□□□ 1.01
SYNE2-201ENST00000341472 ATG13O75143 517 aa21.34■■□□□ 1.01
SYNE2-201ENST00000341472 BEST1O76090 585 aa21.34■■□□□ 1.01
SYNE2-201ENST00000341472 PAPSS2O95340 614 aaPredicted RBP21.34■■□□□ 1.01
SYNE2-201ENST00000341472 NFATC1O95644 943 aa21.34■■□□□ 1.01
SYNE2-201ENST00000341472 FAM200BP0CF97 657 aa21.34■■□□□ 1.01
SYNE2-201ENST00000341472 MBL2P11226 248 aaPredicted RBP21.34■■□□□ 1.01
SYNE2-201ENST00000341472 ADORA2BP29275 332 aa21.34■■□□□ 1.01
SYNE2-201ENST00000341472 LRRC63Q05C16 580 aa21.34■■□□□ 1.01
SYNE2-201ENST00000341472 SNX30Q5VWJ9 437 aa21.34■■□□□ 1.01
SYNE2-201ENST00000341472 ISM2Q6H9L7 571 aa21.34■■□□□ 1.01
SYNE2-201ENST00000341472 TTC39CQ8N584 583 aa21.34■■□□□ 1.01
SYNE2-201ENST00000341472 FBXO44Q9H4M3 255 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms