RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 TEX12Q9BXU0 123 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 SMIM10L2AP0DMW4 78 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 SMIM10L2BP0DMW5 78 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 VDRP11473 427 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 SARSP49591 514 aaKnown RBP13.35□□□□□ -0.27
DNMT1-201ENST00000340748 SLC29A2Q14542 456 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 C10orf120Q5SQS8 335 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 CBWD2Q8IUF1 395 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 PBXIP1Q96AQ6 731 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 PABPC3Q9H361 631 aaKnown RBP13.35□□□□□ -0.27
DNMT1-201ENST00000340748 CYP39A1Q9NYL5 469 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 ZNF142P52746 1687 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-201ENST00000340748 SEPT4O43236 478 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 FAM200BP0CF97 657 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 KCNJ1P48048 391 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 IRAK1P51617 712 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 FAM171A1Q5VUB5 890 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 C16orf89Q6UX73 402 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 MTMR14Q8NCE2 650 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 BRI3BPQ8WY22 251 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 ACSF2Q96CM8 615 aaPredicted RBP13.35□□□□□ -0.27
DNMT1-201ENST00000340748 FTHL17Q9BXU8 183 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 TFR2Q9UP52 801 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 MRC1P22897 1456 aa13.35□□□□□ -0.27
DNMT1-201ENST00000340748 ANGPT2O15123 496 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 DNAJC6O75061 913 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 HARS2P49590 506 aaKnown RBP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 SMAD1Q15797 465 aaKnown RBP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 DCAF6Q58WW2 860 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 NAPEPLDQ6IQ20 393 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 LINC00523Q86TU6 105 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 CEP19Q96LK0 163 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 C20orf96Q9NUD7 363 aaPredicted RBP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.34□□□□□ -0.275e-6■■■□□ 17.4
DNMT1-201ENST00000340748 CDY2AQ9Y6F7 541 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 RPL10AP62906 217 aaKnown RBP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 INPP5AQ14642 412 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 PDK2Q15119 407 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 SYCP2LQ5T4T6 812 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 PRUNE1Q86TP1 453 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 LONP2Q86WA8 852 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 FAM71DQ8N9W8 422 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 TFB1MQ8WVM0 346 aaKnown RBP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 DCUN1D1Q96GG9 259 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 PNKPQ96T60 521 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 AIPL1Q9NZN9 384 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 PTCH2Q9Y6C5 1203 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 NRCAMQ92823 1304 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 F8VZ95 297 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 SPTLC1O15269 473 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 CSDE1O75534 798 aaKnown RBP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 LSM8O95777 96 aaKnown RBP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 KRT16P08779 473 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 CCDC85BQ15834 202 aaPredicted RBP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 SMTNL2Q2TAL5 461 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 FBXO22Q8NEZ5 403 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 USP33Q8TEY7 942 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 CMTM5Q96DZ9 223 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 TASP1Q9H6P5 420 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 KCNA1Q09470 495 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 CELF3Q5SZQ8 465 aaKnown RBP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 LVRNQ6Q4G3 990 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 TRAPPC12Q8WVT3 735 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 KCNK16Q96T55 309 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 KDM4CQ9H3R0 1056 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 SYCE1LA8MT33 242 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 CASP4P49662 377 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 MRPS6P82932 125 aaKnown RBP13.34□□□□□ -0.27
DNMT1-201ENST00000340748 KDSRQ06136 332 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 CYP24A1Q07973 514 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 MEI1Q5TIA1 1274 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 WDR49Q8IV35 697 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 FAM118BQ9BPY3 351 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 MANSC1Q9H8J5 431 aa13.34□□□□□ -0.27
DNMT1-201ENST00000340748 PDHA1P08559 390 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 ACADMP11310 421 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 RNF217Q8TC41 542 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 MUC3BQ9H195 1237 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 GPRC5CQ9NQ84 441 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 KIF17Q9P2E2 1029 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 CAPN6Q9Y6Q1 641 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 ARHGAP10A1A4S6 786 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 CCT8L1PA6NM43 557 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 LRRIQ3A6PVS8 624 aaPredicted RBP13.33□□□□□ -0.28
DNMT1-201ENST00000340748 CKBP12277 381 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 ARL4DP49703 201 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 OCA2Q04671 838 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 MCL1Q07820 350 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 TMEM119Q4V9L6 283 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 CCNJLQ8IV13 435 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 BHMTQ93088 406 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 CBWD1Q9BRT8 395 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 IL17RBQ9NRM6 502 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 TRPM5Q9NZQ8 1165 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 CDYLQ9Y232 598 aa13.33□□□□□ -0.28
DNMT1-201ENST00000340748 SYNCRIPO60506 623 aaKnown RBP13.33□□□□□ -0.28
DNMT1-201ENST00000340748 NDUFS3O75489 264 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms