RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 EDRF1Q3B7T1 1238 aa17.63■□□□□ 0.41
CDK11B-201ENST00000340677 KHDC1Q4VXA5 237 aaKnown RBP17.63■□□□□ 0.41
CDK11B-201ENST00000340677 KCNT1Q5JUK3 1230 aa17.63■□□□□ 0.41
CDK11B-201ENST00000340677 FAM209BQ5JX69 171 aa17.63■□□□□ 0.41
CDK11B-201ENST00000340677 RNASEH2BQ5TBB1 312 aaKnown RBP17.63■□□□□ 0.41
CDK11B-201ENST00000340677 LRIG3Q6UXM1 1119 aa17.63■□□□□ 0.41
CDK11B-201ENST00000340677 Q8N9G6 341 aaPredicted RBP17.63■□□□□ 0.41
CDK11B-201ENST00000340677 PCYOX1LQ8NBM8 494 aa17.63■□□□□ 0.41
CDK11B-201ENST00000340677 GMCL1P1Q8NEA9 526 aa17.63■□□□□ 0.41
CDK11B-201ENST00000340677 HDAC2Q92769 488 aaKnown RBP17.63■□□□□ 0.41
CDK11B-201ENST00000340677 TTC17Q96AE7 1141 aa17.63■□□□□ 0.41
CDK11B-201ENST00000340677 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.63■□□□□ 0.41
CDK11B-201ENST00000340677 CABP5Q9NP86 173 aa17.63■□□□□ 0.41
CDK11B-201ENST00000340677 ASNSD1Q9NWL6 643 aa17.63■□□□□ 0.41
CDK11B-201ENST00000340677 NOVA2Q9UNW9 492 aaKnown RBP17.63■□□□□ 0.41
CDK11B-201ENST00000340677 hCG_2039718K7EN88 272 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 E2F3O00716 465 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 SLC9A3R1O14745 358 aaPredicted RBP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 BMP15O95972 392 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 SELLP14151 372 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 TRAPPC10P48553 1259 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 GMPSP49915 693 aaPredicted RBP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 COPB1P53618 953 aaKnown RBP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 GNG2P59768 71 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 SLC34A1Q06495 639 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 CSTF3Q12996 717 aaKnown RBP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 PTPAQ15257 358 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 DHRS4L2Q6PKH6 230 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 WACQ9BTA9 647 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 LRMDAQ9H2I8 198 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 CNOT10Q9H9A5 744 aaKnown RBP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 RXFP1Q9HBX9 757 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 BARHL2Q9NY43 387 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 PRKAG3Q9UGI9 489 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 NFU1Q9UMS0 254 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 PCDHB13Q9Y5F0 798 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 USP17L5A8MUK1 530 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 POLR1CO15160 346 aaPredicted RBP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 FOXN1O15353 648 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 PGM3O95394 542 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 MTHFD1P11586 935 aaKnown RBP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 SFTPCP11686 197 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 CSTF2P33240 577 aaKnown RBP eCLIP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 ARL1P40616 181 aaPredicted RBP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 HK2P52789 917 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 NOP14P78316 857 aaKnown RBP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 ZNF124Q15973 351 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 AGBL2Q5U5Z8 902 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 EGFLAMQ63HQ2 1017 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 SHC4Q6S5L8 630 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 LRRC71Q8N4P6 559 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 SH2D4AQ9H788 454 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 LAMP5Q9UJQ1 280 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 SALL4Q9UJQ4 1053 aa17.62■□□□□ 0.41
CDK11B-201ENST00000340677 RPH3AQ9Y2J0 694 aaPredicted RBP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 USP15Q9Y4E8 981 aaPredicted RBP17.62■□□□□ 0.41
CDK11B-201ENST00000340677 ESYT2A0FGR8 921 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 STMND1H3BQB6 276 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 CASQ2O14958 399 aaPredicted RBP17.61■□□□□ 0.41
CDK11B-201ENST00000340677 DNAJC6O75061 913 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 PIM1P11309 404 aaPredicted RBP17.61■□□□□ 0.41
CDK11B-201ENST00000340677 SOX11P35716 441 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 MAGOHP61326 146 aaKnown RBP17.61■□□□□ 0.41
CDK11B-201ENST00000340677 SNTA1Q13424 505 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 GRM2Q14416 872 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 DCLRE1AQ6PJP8 1040 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 USP17L2Q6R6M4 530 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 REXO1Q8N1G1 1221 aaKnown RBP17.61■□□□□ 0.41
CDK11B-201ENST00000340677 CASKIN2Q8WXE0 1202 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 MAGOHBQ96A72 148 aaKnown RBP17.61■□□□□ 0.41
CDK11B-201ENST00000340677 SLC47A1Q96FL8 570 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 COG8Q96MW5 612 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 PITHD1Q9GZP4 211 aaPredicted RBP17.61■□□□□ 0.41
CDK11B-201ENST00000340677 HEMK1Q9Y5R4 338 aaPredicted RBP17.61■□□□□ 0.41
CDK11B-201ENST00000340677 SNX5Q9Y5X3 404 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 UMODL1Q5DID0 1318 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 C17orf113A0A1B0GUU1 675 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 CAPN14A8MX76 684 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 PSMD11O00231 422 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 KRIT1O00522 736 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 NCAM2O15394 837 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 NDUFA2O43678 99 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 EEF2P13639 858 aaKnown RBP17.61■□□□□ 0.41
CDK11B-201ENST00000340677 DNAJB1P25685 340 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 AXLP30530 894 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 CARSP49589 748 aaKnown RBP17.61■□□□□ 0.41
CDK11B-201ENST00000340677 TAP1Q03518 808 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 ZNF33BQ06732 778 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 FCRLBQ6BAA4 426 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 OR2W6PQ8NHA6 318 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 ZFP28Q8NHY6 868 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 CAPSLQ8WWF8 208 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 HDAC11Q96DB2 347 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDK11B-201ENST00000340677 DMTF1Q9Y222 760 aa17.61■□□□□ 0.41
CDK11B-201ENST00000340677 GOLGA8QA0A0J9YX86 632 aa17.6■□□□□ 0.41
CDK11B-201ENST00000340677 GOLGA8OA6NCC3 632 aa17.6■□□□□ 0.41
CDK11B-201ENST00000340677 RSPH10B2B2RC85 870 aa17.6■□□□□ 0.41
CDK11B-201ENST00000340677 F8W810 466 aa17.6■□□□□ 0.41
CDK11B-201ENST00000340677 GOLGA8NF8WBI6 632 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms