RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 CALR3Q96L12 384 aaKnown RBP12.29□□□□□ -0.44
C2orf88-201ENST00000340623 TSPAN18Q96SJ8 248 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.29□□□□□ -0.44
C2orf88-201ENST00000340623 TRIM62Q9BVG3 475 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 GPATCH2LQ9NWQ4 482 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 ECEL1O95672 775 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 USP17L7P0C7H9 530 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 IRF1P10914 325 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 ATF2P15336 505 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 PROZP22891 400 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 OR1D2P34982 312 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 ARHGAP25P42331 645 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 ASPAP45381 313 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 FPGSQ05932 587 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 CASC4Q6P4E1 433 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 LRRC31Q6UY01 552 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 FAM172AQ8WUF8 416 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 PPP2R3CQ969Q6 453 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 TWNKQ96RR1 684 aa12.29□□□□□ -0.44
C2orf88-201ENST00000340623 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 GOLGA6L7A0A1B0GV03 622 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 HCRTO43612 131 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 EFCAB14O75071 495 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 ZBED1O96006 694 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 SOX4Q06945 474 aaPredicted RBP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 PSMD5Q16401 504 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 SOWAHAQ2M3V2 549 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 USP41Q3LFD5 358 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 FUT10Q6P4F1 479 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 CNKSR3Q6P9H4 555 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 DDX42Q86XP3 938 aaKnown RBP eCLIP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 SLC4A11Q8NBS3 891 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 ATAD1Q8NBU5 361 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 BCAS4Q8TDM0 211 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 GPR152Q8TDT2 470 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 MCOLN1Q9GZU1 580 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 IKBKGQ9Y6K9 419 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 MYBPHLA2RUH7 354 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 O00370 1275 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 HSPA8P11142 646 aaKnown RBP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 KCNE1P15382 129 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 MAP3K21Q5TCX8 1036 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 FOXR1Q6PIV2 292 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 PPP1R21Q6ZMI0 780 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 TMCO2Q7Z6W1 182 aaPredicted RBP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 SRLQ86TD4 932 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 ZC3H18Q86VM9 953 aaKnown RBP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 ANKRD52Q8NB46 1076 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 TTPALQ9BTX7 342 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 RBM12Q9NTZ6 932 aaKnown RBP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 MYH15Q9Y2K3 1946 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 EN2P19622 333 aaPredicted RBP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 POU5F1Q01860 360 aaKnown RBP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 FAM35AQ86V20 835 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 ZNF280BQ86YH2 543 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 P3H4Q92791 437 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 CERS4Q9HA82 394 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 MRPL17Q9NRX2 175 aaKnown RBP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 MIOSQ9NXC5 875 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 DDX56Q9NY93 547 aaKnown RBP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 AMACRQ9UHK6 382 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 DMGDHQ9UI17 866 aaKnown RBP12.28□□□□□ -0.44
C2orf88-201ENST00000340623 CDY1Q9Y6F8 540 aa12.28□□□□□ -0.44
C2orf88-201ENST00000340623 PITPNM1O00562 1244 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 NRP1O14786 923 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 PROSCO94903 275 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 RPL17P18621 184 aaKnown RBP12.27□□□□□ -0.44
C2orf88-201ENST00000340623 ENPEPQ07075 957 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 B3GNT5Q9BYG0 378 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 SPG21Q9NZD8 308 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 STXBP5LQ9Y2K9 1186 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 MYO7AQ13402 2215 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 PMM2O15305 246 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 MGEA5O60502 916 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 MAP3K6O95382 1288 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 RABGGTBP53611 331 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 BASP1P80723 227 aaKnown RBP12.27□□□□□ -0.44
C2orf88-201ENST00000340623 DR1Q01658 176 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 EFEMP1Q12805 493 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 DDR2Q16832 855 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 UBXN11Q5T124 520 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 DAB2IPQ5VWQ8 1189 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 ANKS3Q6ZW76 656 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 FAM126BQ8IXS8 530 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 DEFB106AQ8N104 65 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 HDAC7Q8WUI4 952 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 PAAF1Q9BRP4 392 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 CNPY3Q9BT09 278 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 OSBPL8Q9BZF1 889 aa12.27□□□□□ -0.44
C2orf88-201ENST00000340623 KIAA1217Q5T5P2 1943 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 F5H423 210 aaPredicted RBP12.27□□□□□ -0.45
C2orf88-201ENST00000340623 TKTP29401 623 aaKnown RBP12.27□□□□□ -0.45
C2orf88-201ENST00000340623 GBP2P32456 591 aaPredicted RBP12.27□□□□□ -0.45
C2orf88-201ENST00000340623 RFC1P35251 1148 aaPredicted RBP12.27□□□□□ -0.45
C2orf88-201ENST00000340623 NUMBP49757 651 aa12.27□□□□□ -0.45
C2orf88-201ENST00000340623 RPL7AP62424 266 aaKnown RBP12.27□□□□□ -0.45
C2orf88-201ENST00000340623 YWHAZP63104 245 aaKnown RBP12.27□□□□□ -0.45
C2orf88-201ENST00000340623 ZNF268Q14587 947 aaPredicted RBP12.27□□□□□ -0.45
C2orf88-201ENST00000340623 TTC31Q49AM3 519 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms