RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 O00370 1275 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 PIRO00625 290 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 ATP2A2P16615 1042 aaKnown RBP15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 DESP17661 470 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 LRPAP1P30533 357 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 GABRB2P47870 512 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 RPL7AP62424 266 aaKnown RBP15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 LMNB2Q03252 620 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 PPP1R7Q15435 360 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 ZFYVE27Q5T4F4 411 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 LCLAT1Q6UWP7 414 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 POLNQ7Z5Q5 900 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 DDX42Q86XP3 938 aaKnown RBP eCLIP15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 C3orf58Q8NDZ4 430 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 SH3GL2Q99962 352 aa15.97■□□□□ 0.15
TUBB4B-201ENST00000340384 LCHNA4D1U4 455 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 CASTOR2A6NHX0 329 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 AGPSO00116 658 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 HOXA2O43364 376 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 ARHGEF15O94989 841 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 TJP3O95049 919 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 KRT1P04264 644 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 KRT7P08729 469 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 PSMA2P25787 234 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 BMP8BP34820 402 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 PTPN7P35236 360 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 CLCNKBP51801 687 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 RABGGTBP53611 331 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 TAS2R40P59535 323 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 TUSC3Q13454 348 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 CCNG2Q16589 344 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 UPP1Q16831 310 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 CYP4A22Q5TCH4 519 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 C9orf57Q5W0N0 161 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 IQCKQ8N0W5 287 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 ZIM3Q96PE6 472 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 TWNKQ96RR1 684 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 SLC9A7Q96T83 725 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 OSBPL8Q9BZF1 889 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 TRIM31Q9BZY9 425 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 KANSL3Q9P2N6 904 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 ADAM21Q9UKJ8 722 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 SNX9Q9Y5X1 595 aa15.96■□□□□ 0.15
TUBB4B-201ENST00000340384 GOLGA6CA6NDK9 693 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 GOLGA8SH3BPF8 625 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 SPTLC1O15269 473 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 ITGB1P05556 798 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 GOLGA6DP0CG33 693 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 RALAP11233 206 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 MYOGP15173 224 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 PBX3P40426 434 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 MLLT1Q03111 559 aaPredicted RBP15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 CALCOCO2Q13137 446 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 PDCLQ13371 301 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 TRADDQ15628 312 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 SV2CQ496J9 727 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 TTC27Q6P3X3 843 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 ABI1Q8IZP0 508 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 SP7Q8TDD2 431 aaPredicted RBP15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 TSPYL1Q9H0U9 437 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 SLC38A7Q9NVC3 462 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 GOLGA6AQ9NYA3 693 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 HESX1Q9UBX0 185 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 HMGXB4Q9UGU5 601 aa15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 MRPL42Q9Y6G3 142 aaKnown RBP15.95■□□□□ 0.14
TUBB4B-201ENST00000340384 TCRBV7S2A1N4TA0A589 114 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 RNF8O76064 485 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 GJC1P36383 396 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 GPD2P43304 727 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 CAV1Q03135 178 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 TMC3Q7Z5M5 1100 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 TMEM173Q86WV6 379 aaPredicted RBP15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 XYLT1Q86Y38 959 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 CMTR2Q8IYT2 770 aaKnown RBP15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 BBOF1Q8ND07 529 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 ATL2Q8NHH9 583 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 FAM76AQ8TAV0 307 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 URGCPQ8TCY9 931 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 CCHCR1Q8TD31 782 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 MCRS1Q96EZ8 462 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 CPXM1Q96SM3 734 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 NCAPGQ9BPX3 1015 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 DCLK3Q9C098 648 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 FAM204AQ9H8W3 233 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 WHRNQ9P202 907 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 TSPAN16Q9UKR8 245 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 NDC80O14777 642 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 GJB6O95452 261 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 GALTP07902 379 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 HSD17B3P37058 310 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 SLC11A1P49279 550 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 TAF6P49848 677 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 EIF3BP55884 814 aaKnown RBP15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 KLF1Q13351 362 aaPredicted RBP15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 ZNF771Q7L3S4 317 aaPredicted RBP15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 SPRED2Q7Z698 418 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 ZDHHC14Q8IZN3 488 aa15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 BCL7CQ8WUZ0 217 aaPredicted RBP15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 UBLCP1Q8WVY7 318 aaPredicted RBP15.94■□□□□ 0.14
TUBB4B-201ENST00000340384 C1orf54Q8WWF1 131 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms