RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 PCDH10Q9P2E7 1040 aa22.26■■□□□ 1.15
VRK2-201ENST00000340157 PI4K2BG5E9Z4 385 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 CAPN15O75808 1086 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 HEXIM1O94992 359 aaKnown RBP22.25■■□□□ 1.15
VRK2-201ENST00000340157 ZRANB2O95218 330 aaKnown RBP eCLIP22.25■■□□□ 1.15
VRK2-201ENST00000340157 TUBBP07437 444 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 RALAP11233 206 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 ITGB8P26012 769 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 MIPP30301 263 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 SNX16P57768 344 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 ADIGQ0VDE8 80 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 ACAP1Q15027 740 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 CYP1B1Q16678 543 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 CYP4V2Q6ZWL3 525 aaPredicted RBP22.25■■□□□ 1.15
VRK2-201ENST00000340157 POLNQ7Z5Q5 900 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 RAPGEF5Q92565 580 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 RNF25Q96BH1 459 aaPredicted RBP22.25■■□□□ 1.15
VRK2-201ENST00000340157 SLITRK1Q96PX8 696 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 PLVAPQ9BX97 442 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 ADAM33Q9BZ11 813 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 SLITRK6Q9H5Y7 841 aa22.25■■□□□ 1.15
VRK2-201ENST00000340157 NRP1O14786 923 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 AP1G2O75843 785 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 SCNN1AP37088 669 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 KLF1Q13351 362 aaPredicted RBP22.24■■□□□ 1.15
VRK2-201ENST00000340157 SMTNL2Q2TAL5 461 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 TTC27Q6P3X3 843 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 GPRIN1Q7Z2K8 1008 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 GSPT2Q8IYD1 628 aaKnown RBP22.24■■□□□ 1.15
VRK2-201ENST00000340157 HNRNPLLQ8WVV9 542 aaKnown RBP22.24■■□□□ 1.15
VRK2-201ENST00000340157 PEBP4Q96S96 227 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 MARCH5Q9NX47 278 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 GOLGA6L10A0A0M3HER8 536 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 C3orf70A6NLC5 250 aaPredicted RBP22.24■■□□□ 1.15
VRK2-201ENST00000340157 HHLA1C9JL84 531 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 BHMG1C9JSJ3 638 aaPredicted RBP22.24■■□□□ 1.15
VRK2-201ENST00000340157 PHF2O75151 1096 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 KRT1P04264 644 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 TFE3P19532 575 aaPredicted RBP22.24■■□□□ 1.15
VRK2-201ENST00000340157 NDUFV1P49821 464 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 BCAR1P56945 870 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 YWHAHQ04917 246 aaPredicted RBP22.24■■□□□ 1.15
VRK2-201ENST00000340157 BEND6Q5SZJ8 279 aaPredicted RBP22.24■■□□□ 1.15
VRK2-201ENST00000340157 MFSD7Q6UXD7 560 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 CCNI2Q6ZMN8 369 aaPredicted RBP22.24■■□□□ 1.15
VRK2-201ENST00000340157 CCDC50Q8IVM0 306 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 RUBCNQ92622 972 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 HEMGNQ9BXL5 484 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 ZWILCHQ9H900 591 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 GDF3Q9NR23 364 aa22.24■■□□□ 1.15
VRK2-201ENST00000340157 ESYT3A0FGR9 886 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 SLC11A1P49279 550 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 SLC8A3P57103 927 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 ADCY2Q08462 1091 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 TRADDQ15628 312 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 KCNT1Q5JUK3 1230 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 RCOR2Q8IZ40 523 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 SMARCD1Q96GM5 515 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 C11orf84Q9BUA3 381 aaPredicted RBP22.23■■□□□ 1.15
VRK2-201ENST00000340157 OSBPL8Q9BZF1 889 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 CSNK1G1Q9HCP0 422 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 ASNSD1Q9NWL6 643 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 PCSK1NQ9UHG2 260 aa22.23■■□□□ 1.15
VRK2-201ENST00000340157 ARHGEF37A1IGU5 675 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 TBKBP1A7MCY6 615 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 TTI1O43156 1089 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 HOXA2O43364 376 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 OAZ2O95190 189 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 PCK1P35558 622 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 GUCY2DQ02846 1103 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 CDO1Q16878 200 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 CNKSR3Q6P9H4 555 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 TMCO3Q6UWJ1 677 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 ARCQ7LC44 396 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 C12orf50Q8NA57 414 aaPredicted RBP22.22■■□□□ 1.15
VRK2-201ENST00000340157 R3HDM2Q9Y2K5 976 aaKnown RBP22.22■■□□□ 1.15
VRK2-201ENST00000340157 TRIM43BA6NCK2 446 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 RNF8O76064 485 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 TRUB2O95900 331 aaKnown RBP22.22■■□□□ 1.15
VRK2-201ENST00000340157 PBX3P40426 434 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 ATP11AP98196 1134 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 RAB41Q5JT25 222 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 SPOCD1Q6ZMY3 1216 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 TMEM173Q86WV6 379 aaPredicted RBP22.22■■□□□ 1.15
VRK2-201ENST00000340157 THEM5Q8N1Q8 247 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 TRIM43Q96BQ3 446 aaPredicted RBP22.22■■□□□ 1.15
VRK2-201ENST00000340157 RBM41Q96IZ5 413 aaKnown RBP22.22■■□□□ 1.15
VRK2-201ENST00000340157 GPR62Q9BZJ7 368 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 ARFGAP3Q9NP61 516 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 DDX56Q9NY93 547 aaKnown RBP22.22■■□□□ 1.15
VRK2-201ENST00000340157 ADAM28Q9UKQ2 775 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 USP18Q9UMW8 372 aa22.22■■□□□ 1.15
VRK2-201ENST00000340157 TADA2AO75478 443 aa22.21■■□□□ 1.15
VRK2-201ENST00000340157 OR4Q2P0C623 313 aa22.21■■□□□ 1.15
VRK2-201ENST00000340157 HSPA1AP0DMV8 641 aaKnown RBP22.21■■□□□ 1.15
VRK2-201ENST00000340157 HSPA1BP0DMV9 641 aaKnown RBP22.21■■□□□ 1.15
VRK2-201ENST00000340157 KRT10P13645 584 aa22.21■■□□□ 1.15
VRK2-201ENST00000340157 BDNFP23560 247 aa22.21■■□□□ 1.15
VRK2-201ENST00000340157 MRPS5P82675 430 aaKnown RBP22.21■■□□□ 1.15
VRK2-201ENST00000340157 SMC1AQ14683 1233 aaKnown RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 219.7 ms