RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 EVPLQ92817 2033 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 SKIP12755 728 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 CD58P19256 250 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 CENPCQ03188 943 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 CCDC6Q16204 474 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 PLEKHG4Q58EX7 1191 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 MPZL3Q6UWV2 235 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 PLEKHH3Q7Z736 793 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 ZNF467Q7Z7K2 595 aaPredicted RBP19.66■□□□□ 0.74
PSPC1-201ENST00000338910 MTDHQ86UE4 582 aaKnown RBP19.66■□□□□ 0.74
PSPC1-201ENST00000338910 ZCCHC9Q8N567 271 aaKnown RBP19.66■□□□□ 0.74
PSPC1-201ENST00000338910 ZNF398Q8TD17 642 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 CFAP57Q96MR6 1250 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 SENP1Q9P0U3 644 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 CPA4Q9UI42 421 aa19.66■□□□□ 0.74
PSPC1-201ENST00000338910 C22orf31O95567 290 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 ASS1P00966 412 aaKnown RBP19.65■□□□□ 0.74
PSPC1-201ENST00000338910 ZNF286BP0CG31 522 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 KLF1Q13351 362 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-201ENST00000338910 RCN1Q15293 331 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 ZNF394Q53GI3 561 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 ZNF365Q70YC5 407 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 C4orf33Q8N1A6 199 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 SCG3Q8WXD2 468 aaKnown RBP19.65■□□□□ 0.74
PSPC1-201ENST00000338910 SMC6Q96SB8 1091 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 C11orf70Q9BRQ4 267 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 PTPRHQ9HD43 1115 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.65■□□□□ 0.74
PSPC1-201ENST00000338910 RBM47A0AV96 593 aaKnown RBP19.65■□□□□ 0.74
PSPC1-201ENST00000338910 TYROBPO43914 113 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 CA4P22748 312 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 AP3M2P53677 418 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 MBTD1Q05BQ5 628 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 ACSBG2Q5FVE4 666 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 TMEM192Q8IY95 271 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 PPTC7Q8NI37 304 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 FOXP3Q9BZS1 431 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 TRIM4Q9C037 500 aa19.65■□□□□ 0.74
PSPC1-201ENST00000338910 ITGBL1O95965 494 aaPredicted RBP19.64■□□□□ 0.74
PSPC1-201ENST00000338910 PROZP22891 400 aa19.64■□□□□ 0.74
PSPC1-201ENST00000338910 TRPC3Q13507 836 aa19.64■□□□□ 0.74
PSPC1-201ENST00000338910 ANKS1BQ7Z6G8 1248 aa19.64■□□□□ 0.74
PSPC1-201ENST00000338910 NPLOC4Q8TAT6 608 aa19.64■□□□□ 0.74
PSPC1-201ENST00000338910 ZNF75CPQ92670 426 aaPredicted RBP19.64■□□□□ 0.74
PSPC1-201ENST00000338910 DDX27Q96GQ7 796 aaKnown RBP19.64■□□□□ 0.74
PSPC1-201ENST00000338910 CNTN6Q9UQ52 1028 aa19.64■□□□□ 0.74
PSPC1-201ENST00000338910 CCDC22O60826 627 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 KRT36O76013 467 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 HOXC6P09630 235 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 WEE2P0C1S8 567 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 KRT15P19012 456 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 CCNG2Q16589 344 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 DAB2IPQ5VWQ8 1189 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 CEP128Q6ZU80 1094 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 MON1BQ7L1V2 547 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 ZNF606Q8WXB4 792 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 TINF2Q9BSI4 451 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 IFT122Q9HBG6 1241 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 NPHS2Q9NP85 383 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 KANSL3Q9P2N6 904 aa19.64■□□□□ 0.73
PSPC1-201ENST00000338910 DOCK3Q8IZD9 2030 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 A0A087WZ62 844 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 POC1B-GALNT4F8VUJ3 575 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 RNF8O76064 485 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 TMEM191BP0C7N4 346 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 SMPD1P17405 629 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 KLRC2P26717 231 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 NOMO3P69849 1222 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 GRM1Q13255 1194 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 LRRC74BQ6ZQY2 392 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 GATA6Q92908 595 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 FDXACB1Q9BRP7 624 aaPredicted RBP19.63■□□□□ 0.73
PSPC1-201ENST00000338910 BTBD10Q9BSF8 475 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 TBX10O75333 385 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 TJP3O95049 919 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 RALAP11233 206 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 ZNF157P51786 506 aaPredicted RBP19.63■□□□□ 0.73
PSPC1-201ENST00000338910 SLC34A1Q06495 639 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 ZNF484Q5JVG2 852 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 HHATQ5VTY9 493 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 TMEM130Q8N3G9 435 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 PTCD3Q96EY7 689 aaKnown RBP19.63■□□□□ 0.73
PSPC1-201ENST00000338910 FAM118BQ9BPY3 351 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 SAYSD1Q9NPB0 183 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 AVENQ9NQS1 362 aaPredicted RBP19.63■□□□□ 0.73
PSPC1-201ENST00000338910 AKT3Q9Y243 479 aa19.63■□□□□ 0.73
PSPC1-201ENST00000338910 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.63■□□□□ 0.73
PSPC1-201ENST00000338910 CAPN9O14815 690 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 GSC2O15499 205 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 ZWINTO95229 277 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 VTNP04004 478 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 CXCL8P10145 99 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 CACNA2D1P54289 1103 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 POLE2P56282 527 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 KPNB1Q14974 876 aaKnown RBP19.62■□□□□ 0.73
PSPC1-201ENST00000338910 FYB2Q5VWT5 728 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 SCARA5Q6ZMJ2 495 aa19.62■□□□□ 0.73
PSPC1-201ENST00000338910 ZC3H18Q86VM9 953 aaKnown RBP19.62■□□□□ 0.73
PSPC1-201ENST00000338910 DRAXINQ8NBI3 349 aaPredicted RBP19.62■□□□□ 0.73
PSPC1-201ENST00000338910 EMID1Q96A84 441 aaPredicted RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms