RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

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Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 TDRD15B5MCY1 1934 aaKnown RBP17.03■□□□□ 0.32
HPS1-202ENST00000338546 ZNF487B1APH4 448 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 NDC80O14777 642 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 HCRTO43612 131 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 PRPSAP2O60256 369 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 GABBR2O75899 941 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 FBXO21O94952 628 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 TYMPP19971 482 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 YY1P25490 414 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 KCNJ1P48048 391 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 GABPB1Q06547 395 aaPredicted RBP17.03■□□□□ 0.32
HPS1-202ENST00000338546 MBTPS1Q14703 1052 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 PDK2Q15119 407 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 TIGD5Q53EQ6 642 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 TXNRD3NBQ6F5E7 133 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 LRIG3Q6UXM1 1119 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 BBS12Q6ZW61 710 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 LRRC8DQ7L1W4 858 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 MAP7D3Q8IWC1 876 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 GOLGA6L1Q8N7Z2 621 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 CCDC89Q8N998 374 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 RNF169Q8NCN4 708 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 C3orf58Q8NDZ4 430 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 MYCBPAPQ8TBZ2 947 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 CENPIQ92674 756 aaPredicted RBP17.03■□□□□ 0.32
HPS1-202ENST00000338546 ART4Q93070 314 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 NKD2Q969F2 451 aaPredicted RBP17.03■□□□□ 0.32
HPS1-202ENST00000338546 NEUROG2Q9H2A3 272 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 ELAC1Q9H777 363 aaKnown RBP17.03■□□□□ 0.32
HPS1-202ENST00000338546 PAK6Q9NQU5 681 aaPredicted RBP17.03■□□□□ 0.32
HPS1-202ENST00000338546 GRHL1Q9NZI5 618 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 SNX24Q9Y343 169 aa17.03■□□□□ 0.32
HPS1-202ENST00000338546 CASTOR2A6NHX0 329 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 PI4K2BG5E9Z4 385 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 TMEM189-UBE2V1I3L0A0 370 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 PITPNM1O00562 1244 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 MDM4O15151 490 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 LIASO43766 372 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 PPFIA2O75334 1257 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 B3GAT3O94766 335 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 POMCP01189 267 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 FAM200BP0CF97 657 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 RPL21P46778 160 aaKnown RBP17.02■□□□□ 0.32
HPS1-202ENST00000338546 KRT17Q04695 432 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 CALCOCO2Q13137 446 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 BYSLQ13895 437 aaKnown RBP17.02■□□□□ 0.32
HPS1-202ENST00000338546 TRNP1Q6NT89 227 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 PAQR9Q6ZVX9 377 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 ANKS1BQ7Z6G8 1248 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 RTN4RL1Q86UN2 441 aaPredicted RBP17.02■□□□□ 0.32
HPS1-202ENST00000338546 PIGZQ86VD9 579 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 KCTD6Q8NC69 237 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 TSEN2Q8NCE0 465 aaKnown RBP17.02■□□□□ 0.32
HPS1-202ENST00000338546 URGCPQ8TCY9 931 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 RSPH1Q8WYR4 309 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 RUFY1Q96T51 708 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 SH3GL2Q99962 352 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 LPIN3Q9BQK8 851 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 C11orf84Q9BUA3 381 aaPredicted RBP17.02■□□□□ 0.32
HPS1-202ENST00000338546 DDX23Q9BUQ8 820 aaKnown RBP17.02■□□□□ 0.32
HPS1-202ENST00000338546 ZWILCHQ9H900 591 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 R3HDM2Q9Y2K5 976 aaKnown RBP17.02■□□□□ 0.32
HPS1-202ENST00000338546 NEU2Q9Y3R4 380 aa17.02■□□□□ 0.32
HPS1-202ENST00000338546 H3BQF6 201 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 AGPSO00116 658 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 SYF2O95926 243 aaKnown RBP17.02■□□□□ 0.31
HPS1-202ENST00000338546 TKTP29401 623 aaKnown RBP17.02■□□□□ 0.31
HPS1-202ENST00000338546 GGCXP38435 758 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 MAPRE1Q15691 268 aaKnown RBP17.02■□□□□ 0.31
HPS1-202ENST00000338546 MDH1BQ5I0G3 518 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 ZDHHC24Q6UX98 284 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 CD300LGQ6UXG3 332 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 STRADAQ7RTN6 431 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 TMC3Q7Z5M5 1100 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 FAM126BQ8IXS8 530 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 PIWIL1Q96J94 861 aaKnown RBP17.02■□□□□ 0.31
HPS1-202ENST00000338546 SUSD3Q96L08 255 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 TXLNGYQ9BZA5 131 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 TRIM31Q9BZY9 425 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 CRTAC1Q9NQ79 661 aa17.02■□□□□ 0.31
HPS1-202ENST00000338546 ATP2C2O75185 946 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 PARNO95453 639 aaKnown RBP17.01■□□□□ 0.31
HPS1-202ENST00000338546 ITGAVP06756 1048 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 KRT10P13645 584 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 ARSEP51690 589 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 PLTPP55058 493 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 VCPP55072 806 aaKnown RBP17.01■□□□□ 0.31
HPS1-202ENST00000338546 DSC1Q08554 894 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 SNX1Q13596 522 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 TFDP2Q14188 446 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 SLMAPQ14BN4 828 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 FAM171BQ6P995 826 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 CLEC20AQ6ZU45 233 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 ZNF365Q70YC5 407 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 THEM5Q8N1Q8 247 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 FAM172AQ8WUF8 416 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 ATG4AQ8WYN0 398 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 APBB2Q92870 758 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 SNF8Q96H20 258 aa17.01■□□□□ 0.31
HPS1-202ENST00000338546 MED10Q9BTT4 135 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms