RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 C2CD4BA6NLJ0 364 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 HHLA1C9JL84 531 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CES2O00748 559 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CEP104O60308 925 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PDGFRAP16234 1089 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CYP2F1P24903 491 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 FLT3P36888 993 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 TAS2R40P59535 323 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 HTRA4P83105 476 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CKAP4Q07065 602 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 NFE2Q16621 373 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 TRNP1Q6NT89 227 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CC2D1AQ6P1N0 951 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RNF168Q8IYW5 571 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SIX6OS1Q8N1H7 587 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 NIPA2Q8N8Q9 360 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RXFP2Q8WXD0 754 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 HERVK_113Q902F9 699 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PGLYRP2Q96PD5 576 aa15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 DMAP1Q9NPF5 467 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-201ENST00000338399 TBC1D4O60343 1298 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CPB1P15086 417 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 GPD1P21695 349 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 GRIK1P39086 918 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PAFAH1B1P43034 410 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ADCY1Q08828 1119 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ZNF211Q13398 564 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CFAP221Q4G0U5 840 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RAB41Q5JT25 222 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SLC26A9Q7LBE3 791 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RIN2Q8WYP3 895 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SPG21Q9NZD8 308 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PCDHB5Q9Y5E4 795 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SLC4A7Q9Y6M7 1214 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PATJQ8NI35 1801 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CTAGE15A4D2H0 777 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SOD2P04179 222 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CTAGE8P0CG41 777 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 TCF4P15884 667 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 GJC1P36383 396 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SCNN1AP37088 669 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ZNF143P52747 638 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 MRPS5P82675 430 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 EFHC1Q5JVL4 640 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 KIAA1841Q6NSI8 718 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 AADACL2Q6P093 401 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CTAGE6Q86UF2 777 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CTAGE4Q8IX94 777 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RHOT1Q8IXI2 618 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 FIBCD1Q8N539 461 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CFAP57Q96MR6 1250 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 LBHD1Q9BQE6 289 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ULBP1Q9BZM6 244 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CARD9Q9H257 536 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CHST7Q9NS84 486 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RNF14Q9UBS8 474 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 INSL6Q9Y581 213 aa15.48■□□□□ 0.07
CDK5RAP3-201ENST00000338399 UQCRHLA0A096LP55 91 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 C2CD2LO14523 706 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 UQCRHP07919 91 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RWDD2BP57060 319 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PSMD5Q16401 504 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 C15orf59Q2T9L4 293 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 HERC6Q8IVU3 1022 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SCN4BQ8IWT1 228 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ARFGAP1Q8N6T3 406 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ATAD1Q8NBU5 361 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 FBXO22Q8NEZ5 403 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 FAM149B1Q96BN6 582 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 FUBP3Q96I24 572 aaKnown RBP eCLIP15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ASNSD1Q9NWL6 643 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.47■□□□□ 0.072e-6■□□□□ 10.3
CDK5RAP3-201ENST00000338399 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CDY1Q9Y6F8 540 aa15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 V9GYY5 206 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PSTPIP1O43586 416 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 LRCH4O75427 683 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 TADA3O75528 432 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 FBXO21O94952 628 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 USP17L7P0C7H9 530 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RPL17P18621 184 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 TERF1P54274 439 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 GPR17Q13304 367 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CDO1Q16878 200 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CCDC14Q49A88 953 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SH3PXD2AQ5TCZ1 1133 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RNF19BQ6ZMZ0 732 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RASGEF1CQ8N431 466 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ACTRT1Q8TDG2 376 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PIK3R5Q8WYR1 880 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 ABHD8Q96I13 439 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 RNPC3Q96LT9 517 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 SLC9A7Q96T83 725 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CNPY3Q9BT09 278 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 OXCT2Q9BYC2 517 aaPredicted RBP15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 CNGB3Q9NQW8 809 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 AAASQ9NRG9 546 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 MTRRQ9UBK8 725 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 PCDHB12Q9Y5F1 795 aa15.46■□□□□ 0.07
CDK5RAP3-201ENST00000338399 MTMR11A4FU01 709 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms