RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 INTS13Q9NVM9 706 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 BCCIPQ9P287 314 aaKnown RBP eCLIP12.27□□□□□ -0.44
CSMD2-202ENST00000338325 SMC3Q9UQE7 1217 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 CPQQ9Y646 472 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 BAHCC1Q9P281 2608 aa12.27□□□□□ -0.44
CSMD2-202ENST00000338325 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 ZNF840PA6NDX5 716 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 SGK1O00141 431 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 MAP3K13O43283 966 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 KAT7O95251 611 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 OLFM2O95897 454 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 ADH1CP00326 375 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 TNNC2P02585 160 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 WARSP23381 471 aaKnown RBP12.27□□□□□ -0.45
CSMD2-202ENST00000338325 DPP6P42658 865 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 MAPK8P45983 427 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 SLC6A11P48066 632 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 NOP14P78316 857 aaKnown RBP12.27□□□□□ -0.45
CSMD2-202ENST00000338325 MESP2Q0VG99 397 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 BYSLQ13895 437 aaKnown RBP12.27□□□□□ -0.45
CSMD2-202ENST00000338325 SPDYCQ5MJ68 293 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 RRAGBQ5VZM2 374 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 KIAA1211LQ6NV74 962 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 C12orf40Q86WS4 652 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 TMEFF1Q8IYR6 380 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 ADGRG2Q8IZP9 1017 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 MYCBPAPQ8TBZ2 947 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 ZCCHC14Q8WYQ9 949 aaKnown RBP12.27□□□□□ -0.45
CSMD2-202ENST00000338325 PCED1BQ96HM7 432 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 RNF38Q9H0F5 515 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 SMPD4Q9NXE4 827 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 MBD1Q9UIS9 605 aaPredicted RBP12.27□□□□□ -0.45
CSMD2-202ENST00000338325 NEUROG3Q9Y4Z2 214 aa12.27□□□□□ -0.45
CSMD2-202ENST00000338325 PCDH15Q96QU1 1955 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 PTPRJQ12913 1337 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 WDFY3Q8IZQ1 3526 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 MYO18AQ92614 2054 aaKnown RBP12.26□□□□□ -0.45
CSMD2-202ENST00000338325 SRRM3A6NNA2 597 aaPredicted RBP12.26□□□□□ -0.45
CSMD2-202ENST00000338325 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.26□□□□□ -0.45
CSMD2-202ENST00000338325 KIAA0391O15091 583 aaKnown RBP12.26□□□□□ -0.45
CSMD2-202ENST00000338325 OAS1P00973 400 aaKnown RBP12.26□□□□□ -0.45
CSMD2-202ENST00000338325 PDGFRBP09619 1106 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 ADH5P11766 374 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 IDEP14735 1019 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 ENGP17813 658 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 TXLNAP40222 546 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 GRIA2P42262 883 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 PTGER3P43115 390 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 KDSRQ06136 332 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 COL9A2Q14055 689 aaPredicted RBP12.26□□□□□ -0.45
CSMD2-202ENST00000338325 SURF1Q15526 300 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 MAP7D1Q3KQU3 841 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 LYSMD4Q5XG99 296 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 SLC23A3Q6PIS1 610 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 DDX42Q86XP3 938 aaKnown RBP eCLIP12.26□□□□□ -0.45
CSMD2-202ENST00000338325 OR5B17Q8NGF7 314 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 HMGB4Q8WW32 186 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 C8orf48Q96LL4 319 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 FGFBP2Q9BYJ0 223 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 ARHGEF4Q9NR80 690 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 TMEM74BQ9NUR3 256 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 CFAP97Q9P2B7 532 aa12.26□□□□□ -0.45
CSMD2-202ENST00000338325 ATXN2Q99700 1313 aaKnown RBP12.25□□□□□ -0.45
CSMD2-202ENST00000338325 PCNX2A6NKB5 2137 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 A0A0A0MRY4 1105 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 TCRBV21S2A2A0A5A6 115 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 FRMD3A2A2Y4 597 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 F8VP50 259 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 SCAMP3O14828 347 aaKnown RBP12.25□□□□□ -0.45
CSMD2-202ENST00000338325 HYAL3O43820 417 aaPredicted RBP12.25□□□□□ -0.45
CSMD2-202ENST00000338325 CD2BP2O95400 341 aaKnown RBP12.25□□□□□ -0.45
CSMD2-202ENST00000338325 ABL1P00519 1130 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 HOXD12P35452 270 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 TNFRSF4P43489 277 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 KIR2DL1P43626 348 aaPredicted RBP12.25□□□□□ -0.45
CSMD2-202ENST00000338325 C8orf34Q49A92 452 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 MDH1BQ5I0G3 518 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 EMC10Q5UCC4 262 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 PEAR1Q5VY43 1037 aaPredicted RBP12.25□□□□□ -0.45
CSMD2-202ENST00000338325 TDRD10Q5VZ19 366 aaKnown RBP12.25□□□□□ -0.45
CSMD2-202ENST00000338325 ERICH6BQ5W0A0 696 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 RHBDF2Q6PJF5 856 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 PIP4P1Q86T03 277 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 FRMD1Q8N878 549 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 SLITRK1Q96PX8 696 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 MMS19Q96T76 1030 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 PANK4Q9NVE7 773 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 FBXO2Q9UK22 296 aaPredicted RBP12.25□□□□□ -0.45
CSMD2-202ENST00000338325 PILRBQ9UKJ0 227 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.25□□□□□ -0.45
CSMD2-202ENST00000338325 CLIC4Q9Y696 253 aa12.25□□□□□ -0.45
CSMD2-202ENST00000338325 ZNF233A6NK53 670 aa12.24□□□□□ -0.45
CSMD2-202ENST00000338325 UPK3BL1B0FP48 263 aa12.24□□□□□ -0.45
CSMD2-202ENST00000338325 UPK3BL2E5RIL1 263 aa12.24□□□□□ -0.45
CSMD2-202ENST00000338325 ADAM23O75077 832 aa12.24□□□□□ -0.45
CSMD2-202ENST00000338325 PRPF6O94906 941 aaKnown RBP12.24□□□□□ -0.45
CSMD2-202ENST00000338325 MBL2P11226 248 aaPredicted RBP12.24□□□□□ -0.45
CSMD2-202ENST00000338325 HOXB3P14651 431 aaPredicted RBP12.24□□□□□ -0.45
CSMD2-202ENST00000338325 ITPKAP23677 461 aa12.24□□□□□ -0.45
CSMD2-202ENST00000338325 TAF10Q12962 218 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms