RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 COL25A1Q9BXS0 654 aaPredicted RBP16.23■□□□□ 0.19
SEC13-201ENST00000337354 HCFC1R1Q9NWW0 138 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.23■□□□□ 0.19
SEC13-201ENST00000337354 ZMYM5Q9UJ78 669 aa16.23■□□□□ 0.19
SEC13-201ENST00000337354 NOCTQ9UK39 431 aaKnown RBP16.23■□□□□ 0.19
SEC13-201ENST00000337354 MAGED2Q9UNF1 606 aaPredicted RBP16.23■□□□□ 0.19
SEC13-201ENST00000337354 SOBPA7XYQ1 873 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 LSM8O95777 96 aaKnown RBP16.22■□□□□ 0.19
SEC13-201ENST00000337354 IL9P15248 144 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 FSHRP23945 695 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 ACADSBP45954 432 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 KIF11P52732 1056 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 SNX16P57768 344 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 ARID5AQ03989 594 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 MTMR3Q13615 1198 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 ASIC2Q16515 512 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 TSR1Q2NL82 804 aaKnown RBP16.22■□□□□ 0.19
SEC13-201ENST00000337354 DENND1BQ6P3S1 775 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 TRIM72Q6ZMU5 477 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 DRC7Q8IY82 874 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 TMEM35BQ8NCS4 154 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 PDZD8Q8NEN9 1154 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 OR8K1Q8NGG5 319 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 NOX5Q96PH1 765 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 SLITRK1Q96PX8 696 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 GCNAQ96QF7 691 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 UHRF1Q96T88 793 aaPredicted RBP16.22■□□□□ 0.19
SEC13-201ENST00000337354 LRRC4Q9HBW1 653 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 CYLDQ9NQC7 956 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 USTQ9Y2C2 406 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 MRPS23Q9Y3D9 190 aaKnown RBP16.22■□□□□ 0.19
SEC13-201ENST00000337354 USP3Q9Y6I4 520 aa16.22■□□□□ 0.19
SEC13-201ENST00000337354 CLUHO75153 1309 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 DLL1O00548 723 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 ADCY5O95622 1261 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 F11P03951 625 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 MYL4P12829 197 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 BMP1P13497 986 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 GABRR2P28476 465 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 CDC25BP30305 580 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 HNRNPH3P31942 346 aaKnown RBP16.21■□□□□ 0.19
SEC13-201ENST00000337354 CDH5P33151 784 aaPredicted RBP16.21■□□□□ 0.19
SEC13-201ENST00000337354 RPL34P49207 117 aaKnown RBP16.21■□□□□ 0.19
SEC13-201ENST00000337354 TBX2Q13207 712 aaPredicted RBP16.21■□□□□ 0.19
SEC13-201ENST00000337354 ARID5BQ14865 1188 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 PRSS36Q5K4E3 855 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 PMF1Q6P1K2 205 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 TMC6Q7Z403 805 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 CNGA4Q8IV77 575 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 HS6ST3Q8IZP7 471 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 SCML4Q8N228 414 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 WDTC1Q8N5D0 677 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 NECAB3Q96P71 396 aaPredicted RBP16.21■□□□□ 0.19
SEC13-201ENST00000337354 AGPAT1Q99943 283 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 PHF7Q9BWX1 381 aaPredicted RBP16.21■□□□□ 0.19
SEC13-201ENST00000337354 IL21Q9HBE4 155 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 SCML2Q9UQR0 700 aa16.21■□□□□ 0.19
SEC13-201ENST00000337354 ZFP37Q9Y6Q3 630 aaPredicted RBP16.21■□□□□ 0.19
SEC13-201ENST00000337354 NCANO14594 1321 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 MTCL1Q9Y4B5 1905 aaKnown RBP16.2■□□□□ 0.18
SEC13-201ENST00000337354 MMEP08473 750 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 CFHP08603 1231 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 USP46P62068 366 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 NTHL1P78549 312 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 KLHL30Q0D2K2 578 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 TAF10Q12962 218 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 TAF3Q5VWG9 929 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 PM20D1Q6GTS8 502 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 CCDC186Q7Z3E2 898 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.2■□□□□ 0.18
SEC13-201ENST00000337354 TMEM110Q86TL2 294 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 SCAMP5Q8TAC9 235 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 FEZF2Q8TBJ5 459 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 SLC4A5Q9BY07 1137 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 ATXN3LQ9H3M9 355 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 POMKQ9H5K3 350 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 GRPEL1Q9HAV7 217 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 ZNF334Q9HCZ1 680 aaPredicted RBP16.2■□□□□ 0.18
SEC13-201ENST00000337354 CNGB3Q9NQW8 809 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 ZNHIT6Q9NWK9 470 aaKnown RBP16.2■□□□□ 0.18
SEC13-201ENST00000337354 TRPM5Q9NZQ8 1165 aa16.2■□□□□ 0.18
SEC13-201ENST00000337354 AKR1B15C9JRZ8 316 aaPredicted RBP16.19■□□□□ 0.18
SEC13-201ENST00000337354 TULP2O00295 520 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 CYP1A1P04798 512 aaPredicted RBP16.19■□□□□ 0.18
SEC13-201ENST00000337354 SERPING1P05155 500 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 PFKLP17858 780 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 DDX6P26196 483 aaKnown RBP eCLIP16.19■□□□□ 0.183e-6■□□□□ 8.8
SEC13-201ENST00000337354 SSTR3P32745 418 aaPredicted RBP16.19■□□□□ 0.18
SEC13-201ENST00000337354 PSEN1P49768 467 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 TKTL1P51854 596 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 FMO1Q01740 532 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 ARHGAP15Q53QZ3 475 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 SNX30Q5VWJ9 437 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 PPP1R2P3Q6NXS1 205 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 GAREM2Q75VX8 874 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 OTOP3Q7RTS5 596 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 MON1AQ86VX9 555 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 SIX6OS1Q8N1H7 587 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 ARHGAP18Q8N392 663 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 MRPS31Q92665 395 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms