RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 F5H423 210 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RAD51CO43502 376 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 PRELPP51888 382 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 EIF2S3LQ2VIR3 472 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 GALNTL6Q49A17 601 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ATP6AP1LQ52LC2 224 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ALFQ53S48 1182 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 DSTYKQ6XUX3 929 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 BORCS5Q969J3 196 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 GTF2A1LQ9UNN4 478 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 AP3M1Q9Y2T2 418 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 SMCO3A2RU48 225 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ECE2O60344 883 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 FARP2O94887 1054 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ATF6P18850 670 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 IFNGR2P38484 337 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 NR1H2P55055 460 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TYW3Q6IPR3 259 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 EIF3MQ7L2H7 374 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TSPAN14Q8NG11 270 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 SYN2Q92777 582 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 KLHL32Q96NJ5 620 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 BSDC1Q9NW68 430 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 SLC25A13Q9UJS0 675 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 CLOCKO15516 846 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 CD2BP2O95400 341 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RALAP11233 206 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TFE3P19532 575 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 STAT3P40763 770 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RPL19P84098 196 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 VAC14Q08AM6 782 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 CLEC16AQ2KHT3 1053 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 DDI2Q5TDH0 399 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF746Q6NUN9 644 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 FMR1NBQ8N0W7 255 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 SAMD3Q8N6K7 520 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RASGRP4Q8TDF6 673 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 PROX1Q92786 737 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TSPAN18Q96SJ8 248 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TIMM44O43615 452 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 GLRA3O75311 464 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 GCP02774 474 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 CCDC166P0CW27 439 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 KCNA6P17658 529 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 KCNMA1Q12791 1236 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 PADI6Q6TGC4 694 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 USP38Q8NB14 1042 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 BHMT2Q9H2M3 363 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 CYP39A1Q9NYL5 469 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 PHF11Q9UIL8 331 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 NUP214P35658 2090 aaPredicted RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 QRICH2Q9H0J4 1663 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 UTYO14607 1347 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 MDM4O15151 490 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RFC5P40937 340 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 RERGLQ9H628 205 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 HPS4Q9NQG7 708 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TMCO1Q9UM00 188 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ASCC3Q8N3C0 2202 aaKnown RBP6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ITSN1Q15811 1721 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ARHGEF33A8MVX0 844 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF185O15231 689 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 CAPGP40121 348 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF846Q147U1 533 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TCEAL5Q5H9L2 206 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 SLC22A9Q8IVM8 553 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 DEFB107AQ8IZN7 70 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 GPD1LQ8N335 351 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 MED15Q96RN5 788 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 TMEM120AQ9BXJ8 343 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 SLC7A5P2Q9GIP4 190 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 PLCL2Q9UPR0 1127 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 NEO1Q92859 1461 aa6.38□□□□□ -1.39
CSMD1-201ENST00000335551 SDK1Q7Z5N4 2213 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 LOC100506127A0A0U1RQW1 187 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 NAA30Q147X3 362 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SAMD4BQ5PRF9 694 aaKnown RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 TDRD5Q8NAT2 981 aaKnown RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF671Q8TAW3 534 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 USP13Q92995 863 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ELOVL6Q9H5J4 265 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SPASTQ9UBP0 616 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 RAD54BQ9Y620 910 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 NOS1APO75052 506 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 RPS6KA3P51812 740 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SRP54P61011 504 aaKnown RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 CCZ1BP86790 482 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 CCZ1P86791 482 aaPredicted RBP6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ACAP2Q15057 778 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 PHKG1Q16816 387 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 DHFR2Q86XF0 187 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 CCNJLQ8IV13 435 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 MINDY2Q8NBR6 621 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 SGF29Q96ES7 293 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 AGPAT1Q99943 283 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 CHCHD6Q9BRQ6 235 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 PNPLA3Q9NST1 481 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 APEX2Q9UBZ4 518 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms