RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 GCP02774 474 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 SERPINE1P05121 402 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 FAUP35544 74 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CSE1LP55060 971 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 RPL19P84098 196 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 GTF2H3Q13889 308 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 USP10Q14694 798 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CDO1Q16878 200 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 RBM43Q6ZSC3 357 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ZNF605Q86T29 641 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 METTL16Q86W50 562 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ADHFE1Q8IWW8 467 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 C1orf54Q8WWF1 131 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 LRFN2Q9ULH4 789 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 SPACA6W5XKT8 324 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 MROH7-TTC4A0A0A0MT08 1334 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 UBDO15205 165 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CYP2C9P11712 490 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 PSMD4P55036 377 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 AQP5P55064 265 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CYP51A1Q16850 503 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 MFSD4BQ5TF39 518 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 SPICE1Q8N0Z3 855 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 DEPDC4Q8N2C3 294 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 RDH11Q8TC12 318 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 PIGSQ96S52 555 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CCSER1Q9C0I3 900 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 HDHD2Q9H0R4 259 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 DRG1Q9Y295 367 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 RALAP11233 206 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ITGA2P17301 1181 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 FMO5P49326 533 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 FAM102AQ5T9C2 384 aaPredicted RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 LRRC47Q8N1G4 583 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 SUPT3HB4E1H0 165 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 TRAPPC3O43617 180 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 UCHL3P15374 230 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CAPZA2P47755 286 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CASP4P49662 377 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 POU4F1Q01851 419 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 TRAF2Q12933 501 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 ARHGEF6Q15052 776 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 FBXO42Q6P3S6 717 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 KYAT3Q6YP21 454 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 MTDHQ86UE4 582 aaKnown RBP5.71□□□□□ -1.5
PTPRB-202ENST00000334414 GLYCTKQ8IVS8 523 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CPNE1Q99829 537 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 COMMD9Q9P000 198 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 HAO1Q9UJM8 370 aa5.71□□□□□ -1.5
PTPRB-202ENST00000334414 CHP2O43745 196 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TSC22D2O75157 780 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 GZMAP12544 262 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ZNF135P52742 658 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 GMFBP60983 142 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ELF3P78545 371 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 CHRNDQ07001 517 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PRKAA1Q13131 559 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ITGADQ13349 1161 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 GALNT18Q6P9A2 607 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 BTN2A2Q8WVV5 523 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 FAR1Q8WVX9 515 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TMEM237Q96Q45 408 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TRIM39Q9HCM9 518 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 GPN1Q9HCN4 374 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 MLXIPLQ9NP71 852 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 THAP1Q9NVV9 213 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PCNAP12004 261 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PHKA1P46020 1223 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 SHROOM1Q2M3G4 852 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TFDP3Q5H9I0 405 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 CPXCR1Q8N123 301 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TRPV1Q8NER1 839 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 HINFPQ9BQA5 517 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TRIM49BA6NDI0 452 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 INO80B-WBP1J3KQ70 363 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 UNC5CO95185 931 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 GNA13Q14344 377 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PARP6Q2NL67 630 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TTLL9Q3SXZ7 439 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 PACS2Q86VP3 889 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 LRRC34Q8IZ02 419 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 C4orf33Q8N1A6 199 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 MREGQ8N565 214 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 EHD3Q9NZN3 535 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 UTYO14607 1347 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 A0A1W2PRG6 482 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TRIM49D1C9J1S8 452 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ANKRD65E5RJM6 399 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 DFFAO00273 331 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ALAS1P13196 640 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ATP6V1B2P21281 511 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 SULT1E1P49888 294 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 CDC42P60953 191 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 BTKQ06187 659 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 MSLNQ13421 630 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 ZNF57Q68EA5 555 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 CWF19L1Q69YN2 538 aaKnown RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TIGD7Q6NT04 549 aaPredicted RBP5.7□□□□□ -1.5
PTPRB-202ENST00000334414 KSR1Q8IVT5 923 aa5.7□□□□□ -1.5
PTPRB-202ENST00000334414 TPCN2Q8NHX9 752 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms