RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 GRM5P41594 1212 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 GYG1P46976 350 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 GCGRP47871 477 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CPA2P48052 419 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 RPL34P49207 117 aaKnown RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TUFMP49411 452 aaKnown RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 AFF3P51826 1226 aaKnown RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 RIPK4P57078 832 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 GSTM4Q03013 218 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 NAPEPLDQ6IQ20 393 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 ABI3BPQ7Z7G0 1075 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 NCAPG2Q86XI2 1143 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 WDR49Q8IV35 697 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CCDC83Q8IWF9 413 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 KIAA0319LQ8IZA0 1049 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TTC39CQ8N584 583 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 PI4KAP1Q8N8J0 262 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 APPL2Q8NEU8 664 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TNIP2Q8NFZ5 429 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TMEM158Q8WZ71 300 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 APPBP2Q92624 585 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 LRIG1Q96JA1 1093 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 MAGEB10Q96LZ2 347 aaPredicted RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CCDC85AQ96PX6 553 aaPredicted RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 PCYT2Q99447 389 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 SLITRK2Q9H156 845 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 DHX33Q9H6R0 707 aaKnown RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 HPS4Q9NQG7 708 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 ACSS2Q9NR19 701 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 THAP10Q9P2Z0 257 aaPredicted RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CLIP2Q9UDT6 1046 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 FTSJ1Q9UET6 329 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CTDP1Q9Y5B0 961 aaPredicted RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 R4GN57 208 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TBKBP1A7MCY6 615 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 B4E1Z4 1266 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 DPYSL4O14531 572 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 MAP3K7O43318 606 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CXCL14O95715 111 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 MYL3P08590 195 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 USP17L7P0C7H9 530 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 GCFC2P16383 781 aaKnown RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CD6P30203 668 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CYLC1P35663 651 aaPredicted RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 SPAM1P38567 509 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 LIFRP42702 1097 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 DSCR9P59020 149 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 RELAQ04206 551 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TBL3Q12788 808 aaKnown RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 KCNH2Q12809 1159 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 VEPH1Q14D04 833 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CFAP221Q4G0U5 840 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 ZRANB3Q5FWF4 1079 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CCDC158Q5M9N0 1113 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 NAPRTQ6XQN6 538 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 STRADAQ7RTN6 431 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 PAQR7Q86WK9 346 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 ELMOD1Q8N336 334 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 HELQQ8TDG4 1101 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 FGF13Q92913 245 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 PURBQ96QR8 312 aaKnown RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 LMF1Q96S06 567 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 SLX1AQ9BQ83 275 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 GCOM2Q9BZD3 368 aaPredicted RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 GSX2Q9BZM3 304 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CSRNP2Q9H175 543 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 RBSNQ9H1K0 784 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 ESRP2Q9H6T0 727 aaKnown RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 CWC22Q9HCG8 908 aaKnown RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 HHATLQ9HCP6 504 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 MYOZ1Q9NP98 299 aaPredicted RBP1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TBC1D13Q9NVG8 400 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 FAM86C1Q9NVL1 165 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 GDAP2Q9NXN4 497 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 TUBE1Q9UJT0 475 aa1.73□□□□□ -2.13
LINC00643-201ENST00000334389 PNMA6FA0A0J9YX94 578 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 PRR19A6NJB7 356 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 TMEM200CA6NKL6 621 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 CYSRT1A8MQ03 144 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 TGM5O43548 720 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 CBX6O95503 412 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 CLDN1O95832 211 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 F11P03951 625 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 P4HBP07237 508 aaKnown RBP1.72□□□□□ -2.13
LINC00643-201ENST00000334389 FNTBP49356 437 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 NRG1Q02297 640 aaPredicted RBP1.72□□□□□ -2.13
LINC00643-201ENST00000334389 SCGB2A2Q13296 93 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 GRM2Q14416 872 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 KMT5BQ4FZB7 885 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 CC2D1BQ5T0F9 858 aaKnown RBP1.72□□□□□ -2.13
LINC00643-201ENST00000334389 FAM205BPQ63HN1 556 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 PLA2G4FQ68DD2 849 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 CXorf57Q6NSI4 855 aaKnown RBP1.72□□□□□ -2.13
LINC00643-201ENST00000334389 PODNL1Q6PEZ8 512 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 WDR74Q6RFH5 385 aaPredicted RBP1.72□□□□□ -2.13
LINC00643-201ENST00000334389 C4orf19Q8IY42 314 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 AHI1Q8N157 1196 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 ANKRD35Q8N283 1001 aa1.72□□□□□ -2.13
LINC00643-201ENST00000334389 CISD2Q8N5K1 135 aaKnown RBP1.72□□□□□ -2.13
LINC00643-201ENST00000334389 ANKRD20A12PQ8NF67 263 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms