RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 LOXL3P58215 753 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 BMPR2Q13873 1038 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 KHDC1LQ5JSQ8 128 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF618Q5T7W0 954 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 PTF1AQ7RTS3 328 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 DENND1CQ8IV53 801 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 KLHDC4Q8TBB5 520 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 DIS3LQ8TF46 1054 aaKnown RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 AIFM3Q96NN9 605 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 SLC46A1Q96NT5 459 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 CGRRF1Q99675 332 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 RHOBTB2Q9BYZ6 727 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 AMBRA1Q9C0C7 1298 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 MRPS18AQ9NVS2 196 aaKnown RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 H3BML4 177 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 AP1G1O43747 822 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 UNC5CO95185 931 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 ALDH2P05091 517 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 EBLN1P0CF75 366 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 NR2F6P10588 404 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 SRSF1Q07955 248 aaKnown RBP eCLIP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 TBCCQ15814 346 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 PKN2Q16513 984 aaKnown RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 LONRF3Q496Y0 759 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 TMEM108Q6UXF1 575 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF551Q7Z340 670 aaPredicted RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 FAM109AQ8N4B1 249 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 JPH3Q8WXH2 748 aaPredicted RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 TTYH3Q9C0H2 523 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 SLC12A5Q9H2X9 1139 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 PCDHA6Q9UN73 950 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 LRRC3CA6NJW4 275 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 VWC2LB2RUY7 222 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 AKAP10O43572 662 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 TLR5O60602 858 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 GRPP07492 148 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 CDK4P11802 303 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 NDUFB7P17568 137 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 HDCP19113 662 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 PPIFP30405 207 aaKnown RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 PXNP49023 591 aaPredicted RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 TOB1P50616 345 aaPredicted RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 RAB1AP62820 205 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 EIF2B5Q13144 721 aaKnown RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 FGL2Q14314 439 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF267Q14586 743 aaPredicted RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 IQCB1Q15051 598 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 VPS53Q5VIR6 699 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 ICE2Q659A1 982 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF804AQ7Z570 1209 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 DAAM2Q86T65 1068 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 RASAL3Q86YV0 1011 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 STAG1Q8WVM7 1258 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 RFKQ969G6 155 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 ARMT1Q9H993 441 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 CPA4Q9UI42 421 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 ST3GAL5Q9UNP4 418 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 SHOC2Q9UQ13 582 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 KIF13BQ9NQT8 1826 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 ARFGEF1Q9Y6D6 1849 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 RGPD8O14715 1765 aaPredicted RBP2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 RGPD5Q99666 1765 aa2.02□□□□□ -2.09
CCDC144A-201ENST00000328495 DCCP43146 1447 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 SSH2Q76I76 1423 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 CYSRT1A8MQ03 144 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 MYO1CO00159 1063 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 RBMXL2O75526 392 aaKnown RBP2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 DNAJB5O75953 348 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 U2AF1L5P0DN76 240 aaPredicted RBP2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 VIPR2P41587 438 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ALDH9A1P49189 494 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 CCT8P50990 548 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 RAB27AP51159 221 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 U2AF1Q01081 240 aaKnown RBP eCLIP2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 COLEC12Q5KU26 742 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ZKSCAN2Q63HK3 967 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 SUMO4Q6EEV6 95 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF788Q6ZQV5 615 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 AMIGO2Q86SJ2 522 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 LRGUKQ96M69 825 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 PTDSS2Q9BVG9 487 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 CDH19Q9H159 772 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ARHGEF3Q9NR81 526 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 PIH1D1Q9NWS0 290 aaKnown RBP2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 MED16Q9Y2X0 877 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 PAPPA2Q9BXP8 1791 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 PLCH1Q4KWH8 1693 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ALS2Q96Q42 1657 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 C1orf167Q5SNV9 1468 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ARHGAP35Q9NRY4 1499 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 BRD4O60885 1362 aaPredicted RBP2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 SLC16A3O15427 465 aaKnown RBP2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 MARCH6O60337 910 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 RFPL1O75677 317 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 THP07101 528 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ELFN1P0C7U0 828 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 CYP2C9P11712 490 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 DRD4P21917 467 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 HTR1BP28222 390 aa2.01□□□□□ -2.09
CCDC144A-201ENST00000328495 ZNF134P52741 427 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms