RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 ARHGEF6Q15052 776 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 SPDYCQ5MJ68 293 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 FUKQ8N0W3 1084 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 KCTD6Q8NC69 237 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 C3orf58Q8NDZ4 430 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 HSPH1Q92598 858 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 SNF8Q96H20 258 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 CFAP57Q96MR6 1250 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 PEBP4Q96S96 227 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 UBN1Q9NPG3 1134 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 PRDM10Q9NQV6 1147 aa15.66■□□□□ 0.1
TPM3-205ENST00000328159 DDX43Q9NXZ2 648 aaKnown RBP15.66■□□□□ 0.1
TPM3-205ENST00000328159 A0A1W2PQ45 241 aaPredicted RBP15.65■□□□□ 0.1
TPM3-205ENST00000328159 A0A1W2PQY0 241 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 LCP1P13796 627 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 ATF2P15336 505 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 ITIH2P19823 946 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 IVDP26440 423 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 SDC4P31431 198 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 LHX1P48742 406 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 BYSLQ13895 437 aaKnown RBP15.65■□□□□ 0.1
TPM3-205ENST00000328159 TRIP13Q15645 432 aaPredicted RBP15.65■□□□□ 0.1
TPM3-205ENST00000328159 UPP1Q16831 310 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 CDO1Q16878 200 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 CCDC142Q17RM4 750 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 RAB6CQ53S08 254 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 TRAF7Q6Q0C0 670 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 BBS12Q6ZW61 710 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 ZNF365Q70YC5 407 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 SLC26A9Q7LBE3 791 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 SLC43A3Q8NBI5 491 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 DUSP16Q9BY84 665 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 RAB6CQ9H0N0 254 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 STARD7Q9NQZ5 370 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 DNPEPQ9ULA0 475 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 ATP8A1Q9Y2Q0 1164 aa15.65■□□□□ 0.1
TPM3-205ENST00000328159 H0YGN5 161 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 CLDN5O00501 218 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 PRPSAP2O60256 369 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 POMCP01189 267 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 KRT14P02533 472 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 CD48P09326 243 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 DESP17661 470 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 GRK4P32298 578 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 PRMT2P55345 433 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 SLC8A3P57103 927 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 ATP11AP98196 1134 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 GRIK3Q13003 919 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 MDH1BQ5I0G3 518 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 KIAA0319Q5VV43 1072 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 CYP4V2Q6ZWL3 525 aaPredicted RBP15.64■□□□□ 0.1
TPM3-205ENST00000328159 GSTA5Q7RTV2 222 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 PIGZQ86VD9 579 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 ECHDC2Q86YB7 292 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 CLEC4CQ8WTT0 213 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 FAM172AQ8WUF8 416 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 ZNF296Q8WUU4 475 aaPredicted RBP15.64■□□□□ 0.1
TPM3-205ENST00000328159 ARL8AQ96BM9 186 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 NCAPGQ9BPX3 1015 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 PAAF1Q9BRP4 392 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 FAM204AQ9H8W3 233 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 NGRNQ9NPE2 291 aaKnown RBP15.64■□□□□ 0.1
TPM3-205ENST00000328159 ADAM21Q9UKJ8 722 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 DRG1Q9Y295 367 aaKnown RBP15.64■□□□□ 0.1
TPM3-205ENST00000328159 NFS1Q9Y697 457 aa15.64■□□□□ 0.1
TPM3-205ENST00000328159 NPR3P17342 541 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 ADCY8P40145 1251 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 PTPN9P43378 593 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 PMS2P54278 862 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 VCPP55072 806 aaKnown RBP15.64■□□□□ 0.09
TPM3-205ENST00000328159 TIGD5Q53EQ6 642 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 TTMPQ5BVD1 217 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 PAQR9Q6ZVX9 377 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 ARCQ7LC44 396 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 ZNF598Q86UK7 904 aaKnown RBP15.64■□□□□ 0.09
TPM3-205ENST00000328159 RFX6Q8HWS3 928 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 CCDC89Q8N998 374 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 TTC13Q8NBP0 860 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 NKD2Q969F2 451 aaPredicted RBP15.64■□□□□ 0.09
TPM3-205ENST00000328159 HAUS1Q96CS2 278 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 SYT15Q9BQS2 421 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 MED10Q9BTT4 135 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 FRMD8P1Q9BZ68 369 aaPredicted RBP15.64■□□□□ 0.09
TPM3-205ENST00000328159 CRTAC1Q9NQ79 661 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 ZNF148Q9UQR1 794 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 INPP5FQ9Y2H2 1132 aa15.64■□□□□ 0.09
TPM3-205ENST00000328159 TIMM13Q9Y5L4 95 aaPredicted RBP15.64■□□□□ 0.09
TPM3-205ENST00000328159 TSC2P49815 1807 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 GOLGA6CA6NDK9 693 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 CST8O60676 142 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 ENDOD1O94919 500 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 GOLGA6DP0CG33 693 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 KLRC2P26717 231 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 DYNLT1P63172 113 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 MBTPS1Q14703 1052 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 OASLQ15646 514 aaKnown RBP15.63■□□□□ 0.09
TPM3-205ENST00000328159 CEP85LQ5SZL2 805 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 SCYL2Q6P3W7 929 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 RHBDF2Q6PJF5 856 aa15.63■□□□□ 0.09
TPM3-205ENST00000328159 ALLCQ8N6M5 410 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms