RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SPPL3Q8TCT6 385 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 AUTS2Q8WXX7 1259 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 SELENOOQ9BVL4 669 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 LCMT1Q9UIC8 334 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 SIGLEC16A6NMB1 481 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 PIK3R2O00459 728 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 PALMO75781 387 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 ABLIM3O94929 683 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 FBXO21O94952 628 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 HAPLN1P10915 354 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 LCP1P13796 627 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 TNNT1P13805 278 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 GRIK1P39086 918 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 RAB33AQ14088 237 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 FAM102AQ5T9C2 384 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 GPRIN1Q7Z2K8 1008 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 SPRED2Q7Z698 418 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 FEZF2Q8TBJ5 459 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 WDR24Q96S15 920 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 PBX4Q9BYU1 374 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 ALG13Q9NP73 1137 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 TLR9Q9NR96 1032 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 METTL5Q9NRN9 209 aaKnown RBP10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 HSFX1Q9UBD0 423 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 MSRAQ9UJ68 235 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 ANAPC7Q9UJX3 599 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 FSCN2O14926 492 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 BUB1BO60566 1050 aaPredicted RBP10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 KRT3P12035 628 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 PBX2P40425 430 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 TKTL1P51854 596 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 SLC6A3Q01959 620 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 ADCY1Q08828 1119 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 SMC1AQ14683 1233 aaKnown RBP10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 SLC26A9Q7LBE3 791 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 TMC7Q7Z402 723 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 SCN4BQ8IWT1 228 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 TDHQ8IZJ6 230 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 SYCE1Q8N0S2 351 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 SCML4Q8N228 414 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 TTC9BQ8N6N2 239 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 POF1BQ8WVV4 589 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 MCEEQ96PE7 176 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 TCF25Q9BQ70 676 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 CRISPLD1Q9H336 500 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 ENTPD7Q9NQZ7 604 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 MAFFQ9ULX9 164 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 IRAK3Q9Y616 596 aa10.77□□□□□ -0.68
VIPAS39-201ENST00000327028 PLXNA3P51805 1871 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 MYO16Q9Y6X6 1858 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 TMEM191CA6NGB0 347 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 TEX28O15482 410 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 SART1O43290 800 aaKnown RBP10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 GJB6O95452 261 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 ERVFC1P60507 584 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 DCUN1D2Q6PH85 259 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 SYT10Q6XYQ8 523 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 SLFN11Q7Z7L1 901 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 SCUBE3Q8IX30 993 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 ZNF461Q8TAF7 563 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 PIWIL1Q96J94 861 aaKnown RBP10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 SPATA17Q96L03 361 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 CEP295NLQ96MC4 621 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 SEPT5Q99719 369 aaPredicted RBP10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 NKX2-4Q9H2Z4 354 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 CNGB3Q9NQW8 809 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 ASNSD1Q9NWL6 643 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 MTUS1Q9ULD2 1270 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 COL4A4P53420 1690 aaPredicted RBP10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 PDE4DIPQ5VU43 2346 aa10.77□□□□□ -0.69
VIPAS39-201ENST00000327028 TNFRSF10BO14763 440 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 FANCGO15287 622 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 CXCL14O95715 111 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 DNAJB1P25685 340 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 MAN1A1P33908 653 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 SLC5A3P53794 718 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 RPL7AP62424 266 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 RPL10AP62906 217 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 DUSP4Q13115 394 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 DAAM2Q86T65 1068 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 JOSD2Q8TAC2 188 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 IRGQQ8WZA9 623 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 EMILIN2Q9BXX0 1053 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 ULBP1Q9BZM6 244 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 TRIM7Q9C029 511 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 DNAI1Q9UI46 699 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 TMEM59LQ9UK28 342 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 H3BNC9 293 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 ZBED1O96006 694 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 ADH1AP07327 375 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 CNPP09543 421 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 ATF2P15336 505 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 CASQ1P31415 396 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 CA8P35219 290 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 GPR15P49685 360 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 DAOAP59103 153 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 MRPS5P82675 430 aaKnown RBP10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 DDR2Q16832 855 aa10.76□□□□□ -0.69
VIPAS39-201ENST00000327028 MGAT5BQ3V5L5 792 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms