RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 EHD4Q9H223 541 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.17□□□□□ -1.1
CIITA-201ENST00000324288 SYNMO15061 1565 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 TNPO2O14787 897 aaKnown RBP8.17□□□□□ -1.1
CIITA-201ENST00000324288 PCNAP12004 261 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 CHRM3P20309 590 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 ATAD3BQ5T9A4 648 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 FOXP4Q8IVH2 680 aaPredicted RBP8.17□□□□□ -1.1
CIITA-201ENST00000324288 PYDC1Q8WXC3 89 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 NAGPAQ9UK23 515 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 N6AMT1Q9Y5N5 214 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 HEG1Q9ULI3 1381 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 KPNA4O00629 521 aaPredicted RBP8.17□□□□□ -1.1
CIITA-201ENST00000324288 PRIM2P49643 509 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 TERB1Q8NA31 727 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 NMRK2Q9NPI5 230 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 LBPP18428 481 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 CSTF3Q12996 717 aaKnown RBP8.17□□□□□ -1.1
CIITA-201ENST00000324288 TCEA2Q15560 299 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 NAB2Q15742 525 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 OTUD3Q5T2D3 398 aaPredicted RBP8.17□□□□□ -1.1
CIITA-201ENST00000324288 EFCAB3Q8N7B9 438 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 C15orf41Q9Y2V0 281 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 P4HBP07237 508 aaKnown RBP8.17□□□□□ -1.1
CIITA-201ENST00000324288 CCNIQ14094 377 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 CLEC16AQ2KHT3 1053 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 SEPT12Q8IYM1 358 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 SH3TC2Q8TF17 1288 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 PIM2Q9P1W9 311 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 ADGRA3Q8IWK6 1321 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 P4HA2O15460 535 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 CYP7B1O75881 506 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 CHRNB3Q05901 458 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 MMGT1Q8N4V1 131 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 TPD52L3Q96J77 140 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 SPATA16Q9BXB7 569 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 VIPAS39Q9H9C1 493 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 KLK14Q9P0G3 267 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 CRLS1Q9UJA2 301 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 ADGRL2O95490 1459 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 HS6ST1O60243 411 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 PSIP1O75475 530 aaKnown RBP8.17□□□□□ -1.1
CIITA-201ENST00000324288 R3HDM1Q15032 1099 aaKnown RBP8.17□□□□□ -1.1
CIITA-201ENST00000324288 DGKDQ16760 1214 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 PDZK1Q5T2W1 519 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 FAM45BPQ6NSW5 357 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 DGCR6LQ9BY27 220 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 DCP1AQ9NPI6 582 aaPredicted RBP8.17□□□□□ -1.1
CIITA-201ENST00000324288 BARHL2Q9NY43 387 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 SNX8Q9Y5X2 465 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 ANKARQ7Z5J8 1434 aa8.17□□□□□ -1.1
CIITA-201ENST00000324288 SEMA3DO95025 777 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 PKNOX1P55347 436 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 NR1D2Q14995 579 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 ZC2HC1CQ53FD0 456 aaPredicted RBP8.16□□□□□ -1.1
CIITA-201ENST00000324288 PPP1R18Q6NYC8 613 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 FRMD5Q7Z6J6 570 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 RBBP8NLQ8NC74 664 aaPredicted RBP8.16□□□□□ -1.1
CIITA-201ENST00000324288 WEE1P30291 646 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 MAPK9P45984 424 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 FNTAP49354 379 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 KCNB1Q14721 858 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 FAM228AQ86W67 206 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 OLFM1Q99784 485 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 BCL2L14Q9BZR8 327 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.16□□□□□ -1.1
CIITA-201ENST00000324288 NPTXRO95502 500 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 SNRNP35Q16560 246 aaKnown RBP8.16□□□□□ -1.1
CIITA-201ENST00000324288 TEX13BQ9BXU2 312 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 HPS5Q9UPZ3 1129 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 DUSP10Q9Y6W6 482 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 TRPC5OSA6NMA1 111 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 ERCC2P18074 760 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 GSTT1P30711 240 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 KRR1Q13601 381 aaKnown RBP8.16□□□□□ -1.1
CIITA-201ENST00000324288 EFHC1Q5JVL4 640 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 TAF8Q7Z7C8 310 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 DEFB107AQ8IZN7 70 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 ATG16L2Q8NAA4 619 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 CINPQ9BW66 212 aaPredicted RBP8.16□□□□□ -1.1
CIITA-201ENST00000324288 CCSER1Q9C0I3 900 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 TMBIM4Q9HC24 238 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 MINPP1Q9UNW1 487 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 SAMD9Q5K651 1589 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 GYPCP04921 128 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 ETS2P15036 469 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 STAT5BP51692 787 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 LGALS3BPQ08380 585 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 COMMD2Q86X83 199 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 QKIQ96PU8 341 aaKnown RBP eCLIP8.16□□□□□ -1.1
CIITA-201ENST00000324288 PPP1R10Q96QC0 940 aaKnown RBP8.16□□□□□ -1.1
CIITA-201ENST00000324288 TRIM62Q9BVG3 475 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.16□□□□□ -1.1
CIITA-201ENST00000324288 CDC42BPGQ6DT37 1551 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 UGGT1Q9NYU2 1555 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 CLOCKO15516 846 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 NDUFA5Q16718 116 aa8.16□□□□□ -1.1
CIITA-201ENST00000324288 CELF1Q92879 486 aaKnown RBP8.16□□□□□ -1.1
CIITA-201ENST00000324288 CLEC4MQ9H2X3 399 aaPredicted RBP8.16□□□□□ -1.1
CIITA-201ENST00000324288 ATAD3AQ9NVI7 634 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms