RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 RGS6P49758 472 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 LRRC41Q15345 812 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 GPR162Q16538 588 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 CDO1Q16878 200 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 RDM1Q8NG50 284 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF224Q9NZL3 707 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 TRIM10Q9UDY6 481 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 MAD2L2Q9UI95 211 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 CORO1CQ9ULV4 474 aaPredicted RBP10.05□□□□□ -0.8
COL12A1-201ENST00000322507 AXIN2Q9Y2T1 843 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 FLT1P17948 1338 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 USP17L5A8MUK1 530 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 RB1P06400 928 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 SLC7A5Q01650 507 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 CENPCQ03188 943 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 C18orf8Q96DM3 657 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 AURKCQ9UQB9 309 aa10.05□□□□□ -0.8
COL12A1-201ENST00000322507 CCT8L1PA6NM43 557 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 NEMP1O14524 444 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 ARIH2O95376 493 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 EYA4O95677 639 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 ACTR2P61160 394 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 PTPROQ16827 1216 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 ULK3Q6PHR2 472 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CATSPERBQ9H7T0 1116 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 RSAD1Q9HA92 442 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 H2AFY2Q9P0M6 372 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 PAK5Q9P286 719 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 VPS4AQ9UN37 437 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 MROH7-TTC4A0A0A0MT08 1334 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 RFC5P40937 340 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 FBXW4P57775 412 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CYP27A1Q02318 531 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CIAPIN1Q6FI81 312 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 SPATA4Q8NEY3 305 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CKAP2Q8WWK9 683 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CCDC115Q96NT0 180 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 VPS11Q9H270 941 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 APEX2Q9UBZ4 518 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 ABCA6Q8N139 1617 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CARNS1A5YM72 827 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 PLOD2O00469 737 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 GARTP22102 1010 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 PDIA2Q13087 525 aaKnown RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF284Q2VY69 593 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 INTS2Q9H0H0 1204 aaKnown RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 MGAT4AQ9UM21 535 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CDYLQ9Y232 598 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 C2orf71A6NGG8 1288 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 PLOD1Q02809 727 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 PYHIN1Q6K0P9 492 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 PPP1R37O75864 691 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 ALDH1A1P00352 501 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 PRG2P13727 222 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 GJA9P57773 515 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 ADGRG1Q9Y653 693 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CCDC88CQ9P219 2028 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 M0QYV0 167 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 FCER1AP12319 257 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 GSTT1P30711 240 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 PRCPP42785 496 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 QPRTQ15274 297 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CITED4Q96RK1 184 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 PNPLA8Q9NP80 782 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 USP42Q9H9J4 1324 aaKnown RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CLTCQ00610 1675 aaKnown RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 A0A1B0GTH6 734 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 FTLP02792 175 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CNTFP26441 200 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 HNMTP50135 292 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 ARF3P61204 181 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 ARF1P84077 181 aaKnown RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 PLCL1Q15111 1095 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 TSNQ15631 228 aaKnown RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 FAM102AQ5T9C2 384 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 LXNQ9BS40 222 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 IGSF9BQ9UPX0 1349 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 AP3S1Q92572 193 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 FIS1Q9Y3D6 152 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 OR14I1A6ND48 311 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 POLBP06746 335 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 SPRP35270 261 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 GCLCP48506 637 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 RNF135Q8IUD6 432 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 HNRNPLLQ8WVV9 542 aaKnown RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 EXOSC4Q9NPD3 245 aaKnown RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 SEC31BQ9NQW1 1179 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CRNNQ9UBG3 495 aaPredicted RBP10.04□□□□□ -0.8
COL12A1-201ENST00000322507 ZNF221Q9UK13 617 aa10.04□□□□□ -0.8
COL12A1-201ENST00000322507 CYBBP04839 570 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 ITIH1P19827 911 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 TPI1P60174 286 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 IZUMO3Q5VZ72 239 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 TTC27Q6P3X3 843 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 NOTOA8MTQ0 251 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 H7C1W4 665 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 FAM58BPP0C7Q3 252 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 HPCAP84074 193 aa10.03□□□□□ -0.8
COL12A1-201ENST00000322507 PPM1NQ8N819 430 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms