RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ROR2Q01974 943 aaKnown RBP13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 AP1B1Q10567 949 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 EFTUD2Q15029 972 aaKnown RBP eCLIP13.25□□□□□ -0.294e-7■■■■■ 27.4
DNMT3A-202ENST00000321117 BOLA3Q53S33 107 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 POTEAQ6S8J7 498 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 TDRPQ86YL5 185 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 TTLL6Q8N841 843 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 TTC16Q8NEE8 873 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 MRIQ9BWK5 157 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 ZNF277Q9NRM2 450 aaPredicted RBP13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 KCNK4Q9NYG8 393 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 UBIAD1Q9Y5Z9 338 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 CCNB1P14635 433 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 MPP2Q14168 576 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 PRPSAP1Q14558 356 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 ASAP3Q8TDY4 903 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 TEX13BQ9BXU2 312 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 GPR88Q9GZN0 384 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 XAB2Q9HCS7 855 aaKnown RBP13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 IL1RAPL1Q9NZN1 696 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 SMNDC1O75940 238 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■■■□□ 16.2
DNMT3A-202ENST00000321117 LYPLA2O95372 231 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 TNFAIP2Q03169 654 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 DPYSL3Q14195 570 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 CDR2LQ86X02 465 aaPredicted RBP13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 SAMD3Q8N6K7 520 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 CATSPER1Q8NEC5 780 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 PGBD4Q96DM1 585 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 SNX25Q9H3E2 840 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 ST6GALNAC4Q9H4F1 302 aa13.25□□□□□ -0.29
DNMT3A-202ENST00000321117 MYH1P12882 1939 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 MYH4Q9Y623 1939 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 E2F8A0AVK6 867 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 APOC4-APOC2K7ER74 178 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 NEMP1O14524 444 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 APOC2P02655 101 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 HMGCS2P54868 508 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 SEPT6Q14141 434 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 PLEKHA7Q6IQ23 1121 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 MON1BQ7L1V2 547 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 CCNYL1Q8N7R7 359 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 CD101Q93033 1021 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 PPP1R36Q96LQ0 422 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 EPB41L4BQ9H329 900 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 MMADHCQ9H3L0 296 aaPredicted RBP13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 ADA2Q9NZK5 511 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 SLC4A7Q9Y6M7 1214 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 CCDC88AQ3V6T2 1871 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 PEX11AO75192 247 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 GMNNO75496 209 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 AP1G2O75843 785 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 DSG3P32926 999 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 NOVP48745 357 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 WDR49Q8IV35 697 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 RNF168Q8IYW5 571 aaPredicted RBP13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 TTC39CQ8N584 583 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 WRNIP1Q96S55 665 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 C12orf65Q9H3J6 166 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 HOXC10Q9NYD6 342 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 ARHGAP26Q9UNA1 814 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 COQ4Q9Y3A0 265 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 DTNAQ9Y4J8 743 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 GLRA3O75311 464 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 SUPT20HL2P0C7V6 817 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 KDELR1P24390 212 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 RFC1P35251 1148 aaPredicted RBP13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 RPL10AP62906 217 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 LAMB3Q13751 1172 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 MXD4Q14582 209 aaPredicted RBP13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 SUPT20HL1Q3ZLR7 823 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 KHDC1Q4VXA5 237 aaKnown RBP13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 PID1Q7Z2X4 250 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 POU5F2Q8N7G0 328 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 LMO3Q8TAP4 145 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 FAM192AQ9GZU8 254 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 LRRC4Q9HBW1 653 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 NUB1Q9Y5A7 615 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 CDY2AQ9Y6F7 541 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 CDY1Q9Y6F8 540 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 ROBO1Q9Y6N7 1651 aa13.24□□□□□ -0.29
DNMT3A-202ENST00000321117 TMEM191CA6NGB0 347 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 EDIL3O43854 480 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 SETSIPP0DME0 302 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 ENO3P13929 434 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 EIF4BP23588 611 aaKnown RBP13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 PHKA2P46019 1235 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 STX1BP61266 288 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 BST1Q10588 318 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 EFHC2Q5JST6 749 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 C4orf22Q6V702 233 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 GADL1Q6ZQY3 521 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 ANKS1BQ7Z6G8 1248 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 CNPY3Q9BT09 278 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 ANLNQ9NQW6 1124 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 GPATCH2LQ9NWQ4 482 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 NKX1-2Q9UD57 310 aaPredicted RBP13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 COL18A1P39060 1754 aa13.23□□□□□ -0.29
DNMT3A-202ENST00000321117 MEI4A8MW99 385 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms