RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 F8VP50 259 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 TGFB1I1O43294 461 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 CYP17A1P05093 508 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 GNL1P36915 607 aaPredicted RBP15.16■□□□□ 0.02
RPP40-201ENST00000319533 EIF2DP41214 584 aaKnown RBP15.16■□□□□ 0.02
RPP40-201ENST00000319533 SNRPFP62306 86 aaKnown RBP15.16■□□□□ 0.02
RPP40-201ENST00000319533 CYP27A1Q02318 531 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 CREB5Q02930 508 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 PSMD6Q15008 389 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 CRY1Q16526 586 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 SNRNP35Q16560 246 aaKnown RBP15.16■□□□□ 0.02
RPP40-201ENST00000319533 USP39Q53GS9 565 aaKnown RBP15.16■□□□□ 0.02
RPP40-201ENST00000319533 FOXD4L5Q5VV16 416 aaPredicted RBP15.16■□□□□ 0.02
RPP40-201ENST00000319533 FILIP1Q7Z7B0 1213 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 PDILTQ8N807 584 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 TTC16Q8NEE8 873 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 OLIG1Q8TAK6 271 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 FOXD4L4Q8WXT5 416 aaPredicted RBP15.16■□□□□ 0.02
RPP40-201ENST00000319533 MMS19Q96T76 1030 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 EDEM2Q9BV94 578 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 GZF1Q9H116 711 aaPredicted RBP15.16■□□□□ 0.02
RPP40-201ENST00000319533 AGPAT3Q9NRZ7 376 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 TMEM30AQ9NV96 361 aa15.16■□□□□ 0.02
RPP40-201ENST00000319533 CFAP47Q6ZTR5 3102 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 LNP1A1A4G5 178 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 ANTXRLA6NF34 631 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 SLC9A3R1O14745 358 aaPredicted RBP15.15■□□□□ 0.02
RPP40-201ENST00000319533 F13A1P00488 732 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 PTPN1P18031 435 aaKnown RBP15.15■□□□□ 0.02
RPP40-201ENST00000319533 CACNA2D1P54289 1103 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 EHHADHQ08426 723 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 TAF10Q12962 218 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 DHCR24Q15392 516 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 HSF5Q4G112 596 aaPredicted RBP15.15■□□□□ 0.02
RPP40-201ENST00000319533 C2orf27AQ580R0 203 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 MDH1BQ5I0G3 518 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 LINC00301Q8NCQ3 95 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 CGRRF1Q99675 332 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 ELOVL4Q9GZR5 314 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 CPQQ9Y646 472 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 NUP205Q92621 2012 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 UBE4BO95155 1302 aa15.15■□□□□ 0.02
RPP40-201ENST00000319533 SPTLC2O15270 562 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 PPP6R2O75170 966 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 YEATS4O95619 227 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 HNRNPLP14866 589 aaKnown RBP eCLIP15.14■□□□□ 0.01
RPP40-201ENST00000319533 GBP1P32455 592 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 AMPD3Q01432 767 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 CYP24A1Q07973 514 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 MESP2Q0VG99 397 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 TDRD10Q5VZ19 366 aaKnown RBP15.14■□□□□ 0.01
RPP40-201ENST00000319533 ANO7Q6IWH7 933 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 RHBDF2Q6PJF5 856 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 TMEM92Q6UXU6 159 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 DDX42Q86XP3 938 aaKnown RBP eCLIP15.14■□□□□ 0.01
RPP40-201ENST00000319533 MDGA1Q8NFP4 955 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 OVCA2Q8WZ82 227 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 SLITRK1Q96PX8 696 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 PNKPQ96T60 521 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 DUSP9Q99956 384 aaKnown RBP15.14■□□□□ 0.01
RPP40-201ENST00000319533 C7orf25Q9BPX7 421 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 TPSD1Q9BZJ3 242 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 XYLT2Q9H1B5 865 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 SNX25Q9H3E2 840 aa15.14■□□□□ 0.01
RPP40-201ENST00000319533 C4orf47A7E2U8 309 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
RPP40-201ENST00000319533 TNNI1P19237 187 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 BCKDHBP21953 392 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 ATICP31939 592 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 KIR2DL1P43626 348 aaPredicted RBP15.13■□□□□ 0.01
RPP40-201ENST00000319533 SLC6A11P48066 632 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 SEC13P55735 322 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 WDR72Q3MJ13 1102 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 FAM26FQ5R3K3 315 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 SNX30Q5VWJ9 437 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 DAB2IPQ5VWQ8 1189 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 PSAPL1Q6NUJ1 521 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 HS2ST1Q7LGA3 356 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 C12orf56Q8IXR9 622 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 CCDC33Q8N5R6 958 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 IL17RCQ8NAC3 791 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 XXYLT1Q8NBI6 393 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 PDZD8Q8NEN9 1154 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 OR6B3Q8NGW1 331 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 SCFD1Q8WVM8 642 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 ZNF516Q92618 1163 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 ZFRQ96KR1 1074 aaKnown RBP15.13■□□□□ 0.01
RPP40-201ENST00000319533 FNBP1Q96RU3 617 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 B3GNT5Q9BYG0 378 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 ZNF518BQ9C0D4 1074 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 DPEP3Q9H4B8 488 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 VRTNQ9H8Y1 702 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 IL37Q9NZH6 218 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 TBC1D14Q9P2M4 693 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 TFIP11Q9UBB9 837 aaKnown RBP15.13■□□□□ 0.01
RPP40-201ENST00000319533 EVLQ9UI08 416 aaPredicted RBP15.13■□□□□ 0.01
RPP40-201ENST00000319533 INVSQ9Y283 1065 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 THADAQ6YHU6 1953 aa15.13■□□□□ 0.01
RPP40-201ENST00000319533 E2F8A0AVK6 867 aa15.12■□□□□ 0.01
RPP40-201ENST00000319533 HAX1O00165 279 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms