RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ITGBL1O95965 494 aaPredicted RBP19.94■□□□□ 0.78
RTN4-201ENST00000317610 NEFHP12036 1026 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 YWHAEP62258 255 aaKnown RBP19.94■□□□□ 0.78
RTN4-201ENST00000317610 BASP1P80723 227 aaKnown RBP19.94■□□□□ 0.78
RTN4-201ENST00000317610 ZRSR2Q15696 482 aaKnown RBP19.94■□□□□ 0.78
RTN4-201ENST00000317610 TTC7BQ86TV6 843 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 ARHGAP24Q8N264 748 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 TAB3Q8N5C8 712 aaPredicted RBP19.94■□□□□ 0.78
RTN4-201ENST00000317610 REPS2Q8NFH8 660 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 SPDYE1Q8NFV5 336 aaPredicted RBP19.94■□□□□ 0.78
RTN4-201ENST00000317610 UCMAQ8WVF2 138 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.94■□□□□ 0.782e-17■■□□□ 11.9
RTN4-201ENST00000317610 KCNK4Q9NYG8 393 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 RLFQ13129 1914 aa19.94■□□□□ 0.78
RTN4-201ENST00000317610 CAPN14A8MX76 684 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 MCF2LO15068 1137 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 RBP3P10745 1247 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 TNFSF9P41273 254 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 MTM1Q13496 603 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 RFX6Q8HWS3 928 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 SCYL3Q8IZE3 742 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 C7orf26Q96N11 449 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 SH3GL3Q99963 347 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 NIFKQ9BYG3 293 aaKnown RBP19.93■□□□□ 0.78
RTN4-201ENST00000317610 NMUR2Q9GZQ4 415 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 CYTH4Q9UIA0 394 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 PPME1Q9Y570 386 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 E5RJQ4 531 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 F8W8V4 182 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 ASPAP45381 313 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 MTMR2Q13614 643 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 RCN2Q14257 317 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 STMN2Q93045 179 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 TSC22D3Q99576 134 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 ZNF302Q9NR11 478 aa19.93■□□□□ 0.78
RTN4-201ENST00000317610 FAM237BA0A1B0GVD1 139 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 C2orf71A6NGG8 1288 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 ADCY3O60266 1144 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 HARSP12081 509 aaKnown RBP19.92■□□□□ 0.78
RTN4-201ENST00000317610 STIP1P31948 543 aaKnown RBP19.92■□□□□ 0.78
RTN4-201ENST00000317610 CDK18Q07002 472 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 TTC39BQ5VTQ0 682 aaPredicted RBP19.92■□□□□ 0.78
RTN4-201ENST00000317610 SLC26A11Q86WA9 606 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 ZNF526Q8TF50 670 aaPredicted RBP19.92■□□□□ 0.78
RTN4-201ENST00000317610 TEKT4Q8WW24 435 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 SLC7A3Q8WY07 619 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 DLGAP2Q9P1A6 1054 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 WDR35Q9P2L0 1181 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 TJP2Q9UDY2 1190 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 ZNF180Q9UJW8 692 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 CHADO15335 359 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 WEE2P0C1S8 567 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 PGM1P36871 562 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 CAPSQ13938 189 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 DUOXA2Q1HG44 320 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 GNPTABQ3T906 1256 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 HSF5Q4G112 596 aaPredicted RBP19.92■□□□□ 0.78
RTN4-201ENST00000317610 WDR78Q5VTH9 848 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 TRIM42Q8IWZ5 723 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 KCTD6Q8NC69 237 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 AGBL3Q8NEM8 1001 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 SRPK1Q96SB4 655 aaKnown RBP19.92■□□□□ 0.78
RTN4-201ENST00000317610 MKS1Q9NXB0 559 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 TTLL3Q9Y4R7 772 aa19.92■□□□□ 0.78
RTN4-201ENST00000317610 COPEO14579 308 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 MAP3K13O43283 966 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 GSTA2P09210 222 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 PSMC1P62191 440 aaKnown RBP19.91■□□□□ 0.78
RTN4-201ENST00000317610 NOMO1Q15155 1222 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 CDHR3Q6ZTQ4 885 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 TMPRSS6Q8IU80 811 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 PPFIBP2Q8ND30 876 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 CCDC110Q8TBZ0 833 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 XYLT2Q9H1B5 865 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 RSAD1Q9HA92 442 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 KRT82Q9NSB4 513 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 SCOCQ9UIL1 159 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 TTLL13PA6NNM8 815 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 WNT10BO00744 389 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 ENDOD1O94919 500 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 MYCNP04198 464 aaPredicted RBP19.91■□□□□ 0.78
RTN4-201ENST00000317610 RFC5P40937 340 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 CCNFP41002 786 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 OAZ1P54368 228 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 YWHAGP61981 247 aaKnown RBP eCLIP19.91■□□□□ 0.78
RTN4-201ENST00000317610 ROR1Q01973 937 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 SP2Q02086 613 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 ACAP1Q15027 740 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 ANGEL2Q5VTE6 544 aaKnown RBP19.91■□□□□ 0.78
RTN4-201ENST00000317610 SLC30A9Q6PML9 568 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 ALYREFQ86V81 257 aaKnown RBP19.91■□□□□ 0.78
RTN4-201ENST00000317610 XYLT1Q86Y38 959 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 PDCD7Q8N8D1 485 aaKnown RBP19.91■□□□□ 0.78
RTN4-201ENST00000317610 SPATA18Q8TC71 538 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 APBB2Q92870 758 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 GATA6Q92908 595 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 TEPSINQ96N21 525 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 ARMCX1Q9P291 453 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 PLLPQ9Y342 182 aa19.91■□□□□ 0.78
RTN4-201ENST00000317610 SMIM24O75264 130 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms