RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 GJA4P35212 333 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 CACNA2D1P54289 1103 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 IFRD2Q12894 506 aaPredicted RBP18.85■□□□□ 0.61
TPM1-203ENST00000317516 EML3Q32P44 896 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 EDRF1Q3B7T1 1238 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 WDR44Q5JSH3 913 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 FSTL4Q6MZW2 842 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 ACOT1Q86TX2 421 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 FAM35AQ86V20 835 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 LONP2Q86WA8 852 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 DDX42Q86XP3 938 aaKnown RBP eCLIP18.85■□□□□ 0.61
TPM1-203ENST00000317516 FBXO32Q969P5 355 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 KCNK16Q96T55 309 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 GTPBP4Q9BZE4 634 aaKnown RBP18.85■□□□□ 0.61
TPM1-203ENST00000317516 SDCBP2Q9H190 292 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 HOOK1Q9UJC3 728 aaKnown RBP18.85■□□□□ 0.61
TPM1-203ENST00000317516 GMEB2Q9UKD1 530 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 VPS13AQ96RL7 3174 aa18.85■□□□□ 0.61
TPM1-203ENST00000317516 LEFTY2O00292 366 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 SLC9A3R1O14745 358 aaPredicted RBP18.84■□□□□ 0.61
TPM1-203ENST00000317516 AP1G2O75843 785 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 GTF2H1P32780 548 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 NDST1P52848 882 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 C1orf220Q5T0J3 134 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 DCLK2Q8N568 766 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 CD101Q93033 1021 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 RNF38Q9H0F5 515 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 LINC00597Q9H2U6 94 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 CYP3A43Q9HB55 503 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 TMEM30AQ9NV96 361 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 SLC8A2Q9UPR5 921 aa18.84■□□□□ 0.61
TPM1-203ENST00000317516 NUP210Q8TEM1 1887 aaPredicted RBP18.84■□□□□ 0.61
TPM1-203ENST00000317516 COL4A2P08572 1712 aa18.83■□□□□ 0.61
TPM1-203ENST00000317516 CHURC1-FNTBB4DL54 471 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 K7ESF4 209 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 CETN3O15182 167 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 STX10O60499 249 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 SMC2O95347 1197 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 OAS1P00973 400 aaKnown RBP18.83■□□□□ 0.6
TPM1-203ENST00000317516 GCLMP48507 274 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 FNTBP49356 437 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 FOXK2Q01167 660 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 SIM2Q14190 667 aaPredicted RBP18.83■□□□□ 0.6
TPM1-203ENST00000317516 PAQR9Q6ZVX9 377 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 FUKQ8N0W3 1084 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 FMR1NBQ8N0W7 255 aaPredicted RBP18.83■□□□□ 0.6
TPM1-203ENST00000317516 ELMO3Q96BJ8 720 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 GSDMAQ96QA5 445 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 FBXO44Q9H4M3 255 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 CHORDC1Q9UHD1 332 aaPredicted RBP18.83■□□□□ 0.6
TPM1-203ENST00000317516 CPQQ9Y646 472 aa18.83■□□□□ 0.6
TPM1-203ENST00000317516 CFAP54Q96N23 3096 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 OLFM2O95897 454 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 EGFP01133 1207 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 TRIM49P0CI25 452 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 TRIM49CP0CI26 452 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 EPB41P11171 864 aaKnown RBP18.82■□□□□ 0.6
TPM1-203ENST00000317516 MBL2P11226 248 aaPredicted RBP18.82■□□□□ 0.6
TPM1-203ENST00000317516 ASPAP45381 313 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 SLC5A3P53794 718 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 HECTD3Q5T447 861 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 KRT39Q6A163 491 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 HEATR6Q6AI08 1181 aaKnown RBP18.82■□□□□ 0.6
TPM1-203ENST00000317516 LAIR1Q6GTX8 287 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 SPOPLQ6IQ16 392 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 PRR23BQ6ZRT6 265 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 SLC2A14Q8TDB8 520 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 CHFRQ96EP1 664 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 TSG101Q99816 390 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 NT5C1AQ9BXI3 368 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 MMRN2Q9H8L6 949 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 TMEM8AQ9HCN3 771 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 KRT82Q9NSB4 513 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 SMPD4Q9NXE4 827 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 IL37Q9NZH6 218 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 GPR179Q6PRD1 2367 aa18.82■□□□□ 0.6
TPM1-203ENST00000317516 TNFRSF10BO14763 440 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 TUBP50607 506 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 PPP3CAQ08209 521 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 INCA1Q0VD86 236 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 PNOCQ13519 176 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 ZCWPW2Q504Y3 356 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 SNX30Q5VWJ9 437 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 WDR5BQ86VZ2 330 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 ADGRG2Q8IZP9 1017 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 TTC39CQ8N584 583 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 SCAMP5Q8TAC9 235 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 TAS1R2Q8TE23 839 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 FAXDC2Q96IV6 333 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 NIF3L1Q9GZT8 377 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 FBRSL1Q9HCM7 1045 aaKnown RBP18.81■□□□□ 0.6
TPM1-203ENST00000317516 CSNK1G1Q9HCP0 422 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 TBC1D14Q9P2M4 693 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 OTOGLQ3ZCN5 2332 aa18.81■□□□□ 0.6
TPM1-203ENST00000317516 PATJQ8NI35 1801 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 CCDC163A0A0D9SF12 145 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 HRO43593 1189 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 RNF40O75150 1001 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 FAM200BP0CF97 657 aa18.8■□□□□ 0.6
TPM1-203ENST00000317516 CCDC130P13994 396 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms