RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TTLL13PA6NNM8 815 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 WDR64B1ANS9 1081 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 BPGMP07738 259 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ADRA2BP18089 450 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 GNA15P30679 374 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ELK3P41970 407 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CPA2P48052 419 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 BASP1P80723 227 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 COG7P83436 770 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 FAAP100Q0VG06 881 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PSMD6Q15008 389 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 FAM47CQ5HY64 1035 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PQLC1Q8N2U9 271 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 NAT8LQ8N9F0 302 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 MCUQ8NE86 351 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 POMGNT1Q8WZA1 660 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 SEMA4DQ92854 862 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 MPP4Q96JB8 637 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 KLC2Q9H0B6 622 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CLIC5Q9NZA1 410 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ARMCX1Q9P291 453 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 STK39Q9UEW8 545 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ZBTB12Q9Y330 459 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 BAZ2BQ9UIF8 2168 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PI4K2BG5E9Z4 385 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CST8O60676 142 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 RNASEH1O60930 286 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 SERPINB2P05120 415 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 VIL1P09327 827 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 FGFR1P11362 822 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 GTF2IP78347 998 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 OTUD4Q01804 1114 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CUL2Q13617 745 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 INSCQ1MX18 579 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 KBTBD12Q3ZCT8 623 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 OGFRL1Q5TC84 451 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF554Q86TJ5 538 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CPNE8Q86YQ8 564 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ANKMY2Q8IV38 441 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PPM1NQ8N819 430 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CPA5Q8WXQ8 436 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 IFT122Q9HBG6 1241 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 MAP3K20Q9NYL2 800 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TMOD2Q9NZR1 351 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ZC3H7BQ9UGR2 993 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 WDR37Q9Y2I8 494 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 RGPD2P0DJD1 1756 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 BCORQ6W2J9 1755 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ATP6V1G1O75348 118 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 DGAT1O75907 488 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 HNRNPCP07910 306 aaKnown RBP eCLIP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 THRAP10827 490 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CNGA3Q16281 694 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PACS1Q6VY07 963 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CLEC10AQ8IUN9 316 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TRIML2Q8N7C3 387 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CYP2W1Q8TAV3 490 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 NLRP7Q8WX94 980 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 STON2Q8WXE9 905 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PANX3Q96QZ0 392 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 GCOM2Q9BZD3 368 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 VPS33BQ9H267 617 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 SLC9A2Q9UBY0 812 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PRR12Q9ULL5 1215 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 HBS1LQ9Y450 684 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 IVNS1ABPQ9Y6Y0 642 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ADAMTSL3P82987 1691 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 SLC16A4O15374 487 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 GLRA3O75311 464 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 ENTPD3O75355 529 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TFAP2AP05549 437 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TNNI1P19237 187 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 HOXA13P31271 388 aaPredicted RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CDKN2BP42772 138 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 BTKQ06187 659 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 NFIXQ14938 502 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 USP41Q3LFD5 358 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 XKR9Q5GH70 373 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 KAZNQ674X7 775 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TATDN1Q6P1N9 297 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TMEM270Q6UE05 265 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 C16orf89Q6UX73 402 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 PRUNE1Q86TP1 453 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 TMEM161BQ8NDZ6 487 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 DIS3LQ8TF46 1054 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 NMD3Q96D46 503 aaKnown RBP4.97□□□□□ -1.61
PTPN13-201ENST00000316707 UIMC1Q96RL1 719 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 WDR18Q9BV38 432 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CCDC106Q9BWC9 280 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 KMT5AQ9NQR1 393 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 CHMP2BQ9UQN3 213 aa4.97□□□□□ -1.61
PTPN13-201ENST00000316707 MATN2O00339 956 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 ADCY3O60266 1144 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 ZNF862O60290 1169 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 PLA2G6O60733 806 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 STAM2O75886 525 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 HLA-DRAP01903 254 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 KRT10P13645 584 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 PRKCHP24723 683 aa4.96□□□□□ -1.61
PTPN13-201ENST00000316707 ALDH1A3P47895 512 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms