RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ARSAP15289 507 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 PFKLP17858 780 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 RFX1P22670 979 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 ANXA13P27216 316 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 MAGEA9P43362 315 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 SLC7A9P82251 487 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 MTAPQ13126 283 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 CCINQ13939 588 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 MTF1Q14872 753 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 GAB4Q2WGN9 574 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 SNX30Q5VWJ9 437 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 NAIF1Q69YI7 327 aaPredicted RBP15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 CLEC17AQ6ZS10 378 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 ASCL5Q7RTU5 278 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 FRMD5Q7Z6J6 570 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 FILIP1Q7Z7B0 1213 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 RALGPS2Q86X27 583 aaPredicted RBP15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 NUP93Q8N1F7 819 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 LMO3Q8TAP4 145 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 CEP63Q96MT8 703 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 TSG101Q99816 390 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 EBF3Q9H4W6 596 aa15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 C8orf33Q9H7E9 229 aaPredicted RBP15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 HOOK1Q9UJC3 728 aaKnown RBP15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 NDRG2Q9UN36 371 aaKnown RBP15.49■□□□□ 0.07
PPP1CA-201ENST00000312989 FRYLO94915 3013 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 ZFHX2Q9C0A1 2572 aaPredicted RBP15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 PATJQ8NI35 1801 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 TRAV19A0A0A6YYK7 116 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 PMM2O15305 246 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 AP1G2O75843 785 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 USP17L7P0C7H9 530 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 CD58P19256 250 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 RUNX3Q13761 415 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 DCAF17Q5H9S7 520 aaPredicted RBP15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 MAMSTRQ6ZN01 415 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 SLC4A11Q8NBS3 891 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 SH3RF2Q8TEC5 729 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 NELFBQ8WX92 580 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 EZH1Q92800 747 aaPredicted RBP15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 NT5C1AQ9BXI3 368 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 IMPG2Q9BZV3 1241 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 RBM12Q9NTZ6 932 aaKnown RBP15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 C2orf42Q9NWW7 574 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 TRPM5Q9NZQ8 1165 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 KIAA1468Q9P260 1216 aa15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 ARMCX3Q9UH62 379 aaPredicted RBP15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 MRPS17Q9Y2R5 130 aaKnown RBP15.48■□□□□ 0.07
PPP1CA-201ENST00000312989 CFAP54Q96N23 3096 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 CKMP06732 381 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 HDCP19113 662 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 PPP1R2P41236 205 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 PPP3CCP48454 512 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 RAD23BP54727 409 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 MARSP56192 900 aaKnown RBP15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 EML3Q32P44 896 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 ITPRIPL2Q3MIP1 535 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 KLHL10Q6JEL2 608 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 Q6ZS52 159 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 TRIM59Q8IWR1 403 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 CSGALNACT1Q8TDX6 532 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 OSCP1Q8WVF1 389 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 OVCA2Q8WZ82 227 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 LMAN1LQ9HAT1 526 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 FBRSL1Q9HCM7 1045 aaKnown RBP15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 CISHQ9NSE2 258 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 OSER1Q9NX31 292 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 GMIPQ9P107 970 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 FBXO4Q9UKT5 387 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 CTNND2Q9UQB3 1225 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 WNT6Q9Y6F9 365 aa15.47■□□□□ 0.07
PPP1CA-201ENST00000312989 ANAPC1Q9H1A4 1944 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 PRR23AA6NEV1 266 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 LEFTY2O00292 366 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 COCHO43405 550 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 STX10O60499 249 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 GREM1O60565 184 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 RTN3O95197 1032 aaPredicted RBP15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 YWHAQP27348 245 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 ADORA2BP29275 332 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 HOXC13P31276 330 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 FMO5P49326 533 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 MAP3K7CLP57077 242 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 CAMK4Q16566 473 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 TMEM196Q5HYL7 178 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 PPP1R26Q5T8A7 1209 aaPredicted RBP15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 TRIML1Q8N9V2 468 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 WBP2Q969T9 261 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 CYFIP2Q96F07 1278 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 MED10Q9BTT4 135 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 LINC00597Q9H2U6 94 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 METTL14Q9HCE5 456 aaKnown RBP15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 SPATA6Q9NWH7 488 aaPredicted RBP15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 THG1LQ9NWX6 298 aaKnown RBP15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 COMMD8Q9NX08 183 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 EHD2Q9NZN4 543 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 CPQQ9Y646 472 aa15.46■□□□□ 0.07
PPP1CA-201ENST00000312989 ATP8B3O60423 1300 aa15.45■□□□□ 0.06
PPP1CA-201ENST00000312989 TRDMT1O14717 391 aaKnown RBP15.45■□□□□ 0.06
PPP1CA-201ENST00000312989 FAM200BP0CF97 657 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms