RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 TFDP3Q5H9I0 405 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 EFHC1Q5JVL4 640 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 DUPD1Q68J44 220 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 TRNP1Q6NT89 227 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 ANKRD33Q7Z3H0 272 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 ANKS1BQ7Z6G8 1248 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 SLCO2A1Q92959 643 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 SUSD3Q96L08 255 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 DCLK3Q9C098 648 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 KLHL11Q9NVR0 708 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 PCSK1NQ9UHG2 260 aa17.55■□□□□ 0.4
CLCF1-201ENST00000312438 MYBPHLA2RUH7 354 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 DAPK3O43293 454 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 DDHD2O94830 711 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 CDKN2BP42772 138 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 HLTFQ14527 1009 aaKnown RBP eCLIP17.54■□□□□ 0.4
CLCF1-201ENST00000312438 SLC39A5Q6ZMH5 540 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 CLEC20AQ6ZU45 233 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 ZNF280BQ86YH2 543 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 KRT222Q8N1A0 295 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 THEM5Q8N1Q8 247 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 CMASQ8NFW8 434 aaPredicted RBP17.54■□□□□ 0.4
CLCF1-201ENST00000312438 PCED1BQ96HM7 432 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 GDAP1L1Q96MZ0 367 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 TRIM51Q9BSJ1 452 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 ACBD3Q9H3P7 528 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 CHST7Q9NS84 486 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 PCDHB7Q9Y5E2 793 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 SPDYE4A6NLX3 237 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 I3L4J1 428 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 BEST1O76090 585 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 PARNO95453 639 aaKnown RBP17.54■□□□□ 0.4
CLCF1-201ENST00000312438 ECEL1O95672 775 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 TYMPP19971 482 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 KDELR1P24390 212 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 KCNJ1P48048 391 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 KCNT1Q5JUK3 1230 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 DDX42Q86XP3 938 aaKnown RBP eCLIP17.54■□□□□ 0.4
CLCF1-201ENST00000312438 COLGALT2Q8IYK4 626 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 KCTD6Q8NC69 237 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 ATL2Q8NHH9 583 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 HASPINQ8TF76 798 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 GRK7Q8WTQ7 553 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 CFAP57Q96MR6 1250 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 FAM193BQ96PV7 902 aaPredicted RBP17.54■□□□□ 0.4
CLCF1-201ENST00000312438 UBXN6Q9BZV1 441 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 LRRC4Q9HBW1 653 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 TBC1D13Q9NVG8 400 aa17.54■□□□□ 0.4
CLCF1-201ENST00000312438 HTTP42858 3142 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 hCG_1818297A0A087WSY0 165 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 C3orf70A6NLC5 250 aaPredicted RBP17.53■□□□□ 0.4
CLCF1-201ENST00000312438 DCDC2CA8MYV0 355 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 PRPSAP2O60256 369 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 KRT10P13645 584 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 PTPN9P43378 593 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 RNASELQ05823 741 aaKnown RBP17.53■□□□□ 0.4
CLCF1-201ENST00000312438 GPS2Q13227 327 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 CCDC142Q17RM4 750 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 C15orf59Q2T9L4 293 aaPredicted RBP17.53■□□□□ 0.4
CLCF1-201ENST00000312438 BOLA3Q53S33 107 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 SH3PXD2AQ5TCZ1 1133 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 KAZNQ674X7 775 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 OVOS1Q6IE37 1185 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 FAM171BQ6P995 826 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 SYDE1Q6ZW31 735 aaPredicted RBP17.53■□□□□ 0.4
CLCF1-201ENST00000312438 CLEC4CQ8WTT0 213 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 TOX2Q96NM4 488 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 RTP3Q9BQQ7 232 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 CRISPLD2Q9H0B8 497 aa17.53■□□□□ 0.4
CLCF1-201ENST00000312438 TMEM189-UBE2V1I3L0A0 370 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 AP1G2O75843 785 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 ECHS1P30084 290 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 GBP1P32455 592 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 ATN1P54259 1190 aaPredicted RBP17.52■□□□□ 0.4
CLCF1-201ENST00000312438 MAP3K7CLP57077 242 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 MRPS5P82675 430 aaKnown RBP17.52■□□□□ 0.4
CLCF1-201ENST00000312438 ATP11AP98196 1134 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 SNX1Q13596 522 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 SMTNL2Q2TAL5 461 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 FAM35AQ86V20 835 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 ABI1Q8IZP0 508 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 ACSF2Q96CM8 615 aaPredicted RBP17.52■□□□□ 0.4
CLCF1-201ENST00000312438 DPH5Q9H2P9 285 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 HIPK3Q9H422 1215 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 KRT82Q9NSB4 513 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 PCDHB8Q9UN66 801 aa17.52■□□□□ 0.4
CLCF1-201ENST00000312438 R3HDM2Q9Y2K5 976 aaKnown RBP17.52■□□□□ 0.4
CLCF1-201ENST00000312438 ITGB1P05556 798 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 FAM153BP0C7A2 387 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 ADIGQ0VDE8 80 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 MAPRE1Q15691 268 aaKnown RBP17.51■□□□□ 0.39
CLCF1-201ENST00000312438 TAZQ16635 292 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 CDO1Q16878 200 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 FAM153CQ494X1 144 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 INTS6LQ5JSJ4 861 aaKnown RBP17.51■□□□□ 0.39
CLCF1-201ENST00000312438 FAM172AQ8WUF8 416 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 ATG4AQ8WYN0 398 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 SMARCD1Q96GM5 515 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 DDX23Q9BUQ8 820 aaKnown RBP17.51■□□□□ 0.39
CLCF1-201ENST00000312438 TRIM31Q9BZY9 425 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms