RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 GUCA1CO95843 209 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF7P17097 686 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 EEF1B2P24534 225 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 EPHB2P29323 1055 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CACNB3P54284 484 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ENPEPQ07075 957 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 LBRQ14739 615 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 FSCN1Q16658 493 aaKnown RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 AADATQ8N5Z0 425 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 B3GALNT2Q8NCR0 500 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 FBXO22Q8NEZ5 403 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 C18orf25Q96B23 403 aaPredicted RBP3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ERGIC2Q96RQ1 377 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 PXMP2Q9NR77 195 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 ARHGEF38Q9NXL2 777 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 GTSE1Q9NYZ3 720 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 CRLS1Q9UJA2 301 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 GTF3C4Q9UKN8 822 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 NUP98P52948 1817 aa3.31□□□□□ -1.88
CLOCK-201ENST00000309964 NFASCO94856 1347 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 KLHL41O60662 606 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 VPS26AO75436 327 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TRPA1O75762 1119 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CD2BP2O95400 341 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ADH1CP00326 375 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RBP1P09455 135 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PABPC1P11940 636 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 AKR1B1P15121 316 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 UCHL3P15374 230 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RPL22P35268 128 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 BST2Q10589 180 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 NAA35Q5VZE5 725 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TAS2R42Q7RTR8 314 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 HS6ST3Q8IZP7 471 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ATL1Q8WXF7 558 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ANKS1AQ92625 1134 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 FAM167BQ9BTA0 163 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TTC7AQ9ULT0 858 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TRIM17Q9Y577 477 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 AKAP11Q9UKA4 1901 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PDHXO00330 501 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ACKR2O00590 384 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SRGAP2O75044 1071 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 MTA2O94776 668 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CSH1P0DML2 217 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CSH2P0DML3 217 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 GUCY2FP51841 1108 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SNRPD1P62314 119 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 OCA2Q04671 838 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 POU5F1BQ06416 359 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SPDYAQ5MJ70 313 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TTC39BQ5VTQ0 682 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 VSTM1Q6UX27 236 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TLK2Q86UE8 772 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF558Q96NG5 402 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TINF2Q9BSI4 451 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 RMND5AQ9H871 391 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 C6orf203Q9P0P8 240 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 DTNAQ9Y4J8 743 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 HEATR9A2RTY3 570 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 HS6ST1O60243 411 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 LDOC1O95751 146 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SLC4A1P02730 911 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CCT8P50990 548 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 EXOSC10Q01780 885 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 GCNT1Q02742 428 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CYTH1Q15438 398 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PTGISQ16647 500 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CTXN3Q4LDR2 81 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 C16orf89Q6UX73 402 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 UNC93AQ86WB7 457 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SLC35F6Q8N357 371 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 DCLK2Q8N568 766 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ANKRD13CQ8N6S4 541 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CCDC185Q8N715 623 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 REPS2Q8NFH8 660 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 MYCBPAPQ8TBZ2 947 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 DACT3Q96B18 629 aaPredicted RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM159Q96B96 161 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PLEKHA8Q96JA3 519 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 KCNK16Q96T55 309 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 CCDC3Q9BQI4 270 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 C11orf70Q9BRQ4 267 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 WDR18Q9BV38 432 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 DPH5Q9H2P9 285 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 MIEF1Q9NQG6 463 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 NCKIPSDQ9NZQ3 722 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TMEM63CQ9P1W3 806 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 BAIAP2L1Q9UHR4 511 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF711Q9Y462 761 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TRPV2Q9Y5S1 764 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 UPP2O95045 317 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 IGSF6O95976 241 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 VIL1P09327 827 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 PRLRP16471 622 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 TGM2P21980 687 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 EIF4BP23588 611 aaKnown RBP3.3□□□□□ -1.88
CLOCK-201ENST00000309964 SERPINA4P29622 427 aa3.3□□□□□ -1.88
CLOCK-201ENST00000309964 ZNF200P98182 395 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms