RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 ZBTB33Q86T24 672 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 NAT8LQ8N9F0 302 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 PPP2R3CQ969Q6 453 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 FBXL18Q96ME1 805 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 PANX3Q96QZ0 392 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 NDNQ99608 321 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 TARS2Q9BW92 718 aaKnown RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 DMAP1Q9NPF5 467 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 KCNK4Q9NYG8 393 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 NXF1Q9UBU9 619 aaKnown RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 ZC3H7BQ9UGR2 993 aaKnown RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 SLC7A8Q9UHI5 535 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 ZNRF3Q9ULT6 936 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 POLR2BP30876 1174 aaKnown RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 PSMC1P62191 440 aaKnown RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 ROR1Q01973 937 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 PSMD6Q15008 389 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 TRIP10Q15642 601 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 MROH9Q5TGP6 573 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 LRRC38Q5VT99 294 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 C1orf228Q6PIY5 440 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 SLC26A11Q86WA9 606 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 CHSY1Q86X52 802 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 WDR75Q8IWA0 830 aaKnown RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 NDUFAF2Q8N183 169 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 NME8Q8N427 588 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 SLC35B2Q8TB61 432 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 ZNF341Q9BYN7 854 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 STRIP2Q9ULQ0 834 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 hCG_2014768A0A024R1R8 64 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 MAGEC1O60732 1142 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 TM7SF2O76062 418 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 PDE5AO76074 875 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 LYPLA2O95372 231 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 RFC1P35251 1148 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 WNT7BP56706 349 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 STX3Q13277 289 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 MMEL1Q495T6 779 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 LIN52Q52LA3 116 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 RABGAP1LQ5R372 815 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 IGDCC3Q8IVU1 814 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 OR5B17Q8NGF7 314 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 NMD3Q96D46 503 aaKnown RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 EBF3Q9H4W6 596 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 G3BP2Q9UN86 482 aaKnown RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 FARP1Q9Y4F1 1045 aaPredicted RBP11.62□□□□□ -0.55
PTPN7-201ENST00000309017 HEY1Q9Y5J3 304 aa11.62□□□□□ -0.55
PTPN7-201ENST00000309017 PTPRJQ12913 1337 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 POLRMTO00411 1230 aaKnown RBP11.61□□□□□ -0.55
PTPN7-201ENST00000309017 C4BPAP04003 597 aaKnown RBP11.61□□□□□ -0.55
PTPN7-201ENST00000309017 ICAM1P05362 532 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 APRTP07741 180 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 CD48P09326 243 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 NCF2P19878 526 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-201ENST00000309017 ACO1P21399 889 aaKnown RBP11.61□□□□□ -0.55
PTPN7-201ENST00000309017 ZBTB41Q5SVQ8 909 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 DACT2Q5SW24 774 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 SYTL5Q8TDW5 730 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-201ENST00000309017 UBIAD1Q9Y5Z9 338 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 LOC100653049A0A140TA62 436 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 DCAF8L1A6NGE4 600 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 F8W8V4 182 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 H0YCG3 227 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 DGAT1O75907 488 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 KRT34O76011 436 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 KRT38O76015 456 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 VNN1O95497 513 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 KRT19P08727 400 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 TFAMQ00059 246 aaKnown RBP11.61□□□□□ -0.55
PTPN7-201ENST00000309017 ZNF252P-AS1Q0IIN9 211 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 DPYSL3Q14195 570 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 CDO1Q16878 200 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 LPCAT4Q643R3 524 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 CASC4Q6P4E1 433 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 CDHR3Q6ZTQ4 885 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 SLC44A1Q8WWI5 657 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 OPTNQ96CV9 577 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 C6orf222P0C671 652 aaPredicted RBP11.61□□□□□ -0.55
PTPN7-201ENST00000309017 EFHC1Q5JVL4 640 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 SCYL2Q6P3W7 929 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 NPNTQ6UXI9 565 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 RAPH1Q70E73 1250 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 MARK2Q7KZI7 788 aaKnown RBP11.61□□□□□ -0.55
PTPN7-201ENST00000309017 OR6Y1Q8NGX8 325 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 MASTLQ96GX5 879 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 SPATA16Q9BXB7 569 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 IFT122Q9HBG6 1241 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 SOX13Q9UN79 622 aa11.61□□□□□ -0.55
PTPN7-201ENST00000309017 APOBEC2Q9Y235 224 aaKnown RBP11.61□□□□□ -0.55
PTPN7-201ENST00000309017 ANKRD33BA6NCL7 494 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 DKC1O60832 514 aaKnown RBP eCLIP11.6□□□□□ -0.55
PTPN7-201ENST00000309017 RAP1GDS1P52306 607 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 CDH6P55285 790 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 ACTR3P61158 418 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 TAP1Q03518 808 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 RSPH3Q86UC2 560 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 ZNF276Q8N554 614 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 SAMD3Q8N6K7 520 aa11.6□□□□□ -0.55
PTPN7-201ENST00000309017 USP6NLQ92738 828 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 752.4 ms