RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.49□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 LINC01553A4QN01 128 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 GOLGA8SH3BPF8 625 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PAPSS1O43252 624 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CEP104O60308 925 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 FAM200BP0CF97 657 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RGS7P49802 495 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RWDD2BP57060 319 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TSPY1Q01534 308 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 OGDHQ02218 1023 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SPOUT1Q5T280 376 aaKnown RBP13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 DCAF12L1Q5VU92 463 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 FAM171A1Q5VUB5 890 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 OR6B2Q6IFH4 312 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CLEC20AQ6ZU45 233 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 FAM183BPQ6ZVS7 135 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SLC26A9Q7LBE3 791 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 FAM35AQ86V20 835 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PIGZQ86VD9 579 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RHOT1Q8IXI2 618 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 MMGT1Q8N4V1 131 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 NAP1L3Q99457 506 aaPredicted RBP13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PRO3102Q9H379 93 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CHST7Q9NS84 486 aa13.48□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 C2CD4BA6NLJ0 364 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PGRMC1O00264 195 aaKnown RBP13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CLDN5O00501 218 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 DPYSL4O14531 572 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TBC1D4O60343 1298 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 GJB6O95452 261 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 MYOGP15173 224 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PPM1AP35813 382 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ZNF143P52747 638 aaPredicted RBP13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CCDC142Q17RM4 750 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RAB41Q5JT25 222 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 RTP2Q5QGT7 225 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 VARS2Q5ST30 1063 aaKnown RBP13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 FAM102AQ5T9C2 384 aaPredicted RBP13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PRPF38BQ5VTL8 546 aaKnown RBP13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CC2D1AQ6P1N0 951 aaPredicted RBP13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 LRRTM3Q86VH5 581 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 OR10T2Q8NGX3 314 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 JOSD2Q8TAC2 188 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SMARCD1Q96GM5 515 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 MS4A14Q96JA4 679 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 B3GALT6Q96L58 329 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 NCAPGQ9BPX3 1015 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 MED10Q9BTT4 135 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PLVAPQ9BX97 442 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ZCWPW1Q9H0M4 648 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PNPLA8Q9NP80 782 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 AAASQ9NRG9 546 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 METTL5Q9NRN9 209 aaKnown RBP13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ASNSD1Q9NWL6 643 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PCDHA11Q9Y5I1 949 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 OR6C75A6NL08 312 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 F8VP50 259 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 FBXO21O94952 628 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 GLI1P08151 1106 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 DNA2P51530 1060 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PTPROQ16827 1216 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 ERCC6LQ2NKX8 1250 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 EFHC1Q5JVL4 640 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 C4orf50Q6ZRC1 276 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 POLNQ7Z5Q5 900 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 DDX53Q86TM3 631 aaKnown RBP13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CPNE8Q86YQ8 564 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SCUBE3Q8IX30 993 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 KATNAL2Q8IYT4 538 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 DCP1BQ8IZD4 617 aaKnown RBP13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SCML4Q8N228 414 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 GPR161Q8N6U8 529 aaKnown RBP13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 MYLPFQ96A32 169 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 TMEM169Q96HH4 297 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 SMOQ99835 787 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 CNPY3Q9BT09 278 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 HERC2P3Q9BVR0 1158 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 KRT82Q9NSB4 513 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 PCDHB12Q9Y5F1 795 aa13.47□□□□□ -0.25
SHANK2-AS3-201ENST00000307548 HHLA1C9JL84 531 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 AP1G2O75843 785 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 BEST1O76090 585 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 FGF18O76093 207 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 SOD2P04179 222 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 GPD1P21695 349 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PSMA2P25787 234 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PCK1P35558 622 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 BMPR1AP36894 532 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 MARCKSL1P49006 195 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TAS2R40P59535 323 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 NFE2Q16621 373 aaPredicted RBP13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 SPRED2Q7Z698 418 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 ZMIZ2Q8NF64 920 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 PIK3R5Q8WYR1 880 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 GBF1Q92538 1859 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 FUBP3Q96I24 572 aaKnown RBP eCLIP13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TMEM209Q96SK2 561 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TTPALQ9BTX7 342 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 TMLHEQ9NVH6 421 aa13.46□□□□□ -0.26
SHANK2-AS3-201ENST00000307548 COLQQ9Y215 455 aaPredicted RBP13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms