RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 TXNDC11Q6PKC3 985 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 CYP4Z1Q86W10 505 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SLC26A11Q86WA9 606 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ADHFE1Q8IWW8 467 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PTPRN2Q92932 1015 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 THAP11Q96EK4 314 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SEC31BQ9NQW1 1179 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PTBP2Q9UKA9 531 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 FAM95CA0A1B0GW59 222 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 EEF1B2P24534 225 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 AP3S2P59780 193 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 HIBCHQ6NVY1 386 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 PMF1Q6P1K2 205 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ADSSL1Q8N142 457 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 CCDC33Q8N5R6 958 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 AMER2Q8N7J2 671 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 DENND1AQ8TEH3 1009 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SOCS4Q8WXH5 440 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 KCTD13Q8WZ19 329 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 NSL1Q96IY1 281 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 RPRD1AQ96P16 312 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 RMDN3Q96TC7 470 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 LRRC40Q9H9A6 602 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 TLR7Q9NYK1 1049 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 ZNF510Q9Y2H8 683 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PIPSLA2A3N6 862 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 KRT75O95678 551 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 C6orf222P0C671 652 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 PRIM2P49643 509 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PNLIPRP1P54315 467 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 LINC00299Q6ZSB3 139 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 METTL13Q8N6R0 699 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 FAM81AQ8TBF8 368 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SLC39A3Q9BRY0 314 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 TRIM31Q9BZY9 425 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 NEUROG2Q9H2A3 272 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ST6GALNAC4Q9H4F1 302 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PCDHGB3Q9Y5G1 929 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 CSE1LP55060 971 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 PTP4A2Q12974 167 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 HOPXQ9BPY8 73 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 CALN1Q9BXU9 219 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ITGB4P16144 1822 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ZNF638Q14966 1978 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 SDR42E2A6NKP2 422 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 NR2C1P13056 603 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 POLR2EP19388 210 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 CASP5P51878 434 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 BEND6Q5SZJ8 279 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 PCSK9Q8NBP7 692 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 HDAC2Q92769 488 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 OSBPL11Q9BXB4 747 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 H0YC42 278 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 NPR3P17342 541 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 COASYQ13057 564 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 GRTP1Q5TC63 336 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SNX30Q5VWJ9 437 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 DRICH1Q6PGQ1 229 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 C12orf56Q8IXR9 622 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 HIC2Q96JB3 615 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 RWDD3Q9Y3V2 267 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 ZNF335Q9H4Z2 1342 aaPredicted RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 TIAM2Q8IVF5 1701 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 GPR182O15218 404 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 TCEA3O75764 348 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 CD2BP2O95400 341 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 WARSP23381 471 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 CXCR2P25025 360 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 GGCXP38435 758 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 TRIM71Q2Q1W2 868 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 DALRD3Q5D0E6 543 aaKnown RBP4.16□□□□□ -1.74
USH2A-201ENST00000307340 PADI6Q6TGC4 694 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SLCO2A1Q92959 643 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 OSBP2Q969R2 916 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 UROC1Q96N76 676 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 RDH12Q96NR8 316 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 VCPKMTQ9H867 229 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 SCN8AQ9UQD0 1980 aa4.16□□□□□ -1.74
USH2A-201ENST00000307340 PTPN4P29074 926 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 MAGOHP61326 146 aaKnown RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 DPY19L1Q2PZI1 675 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 ZNF484Q5JVG2 852 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 NXNQ6DKJ4 435 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 PIWIL4Q7Z3Z4 852 aaKnown RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 SLC26A7Q8TE54 656 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 AGO2Q9UKV8 859 aaKnown RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 TPRKBQ9Y3C4 175 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 TOM1L1O75674 476 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 SERPINI2O75830 405 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 TPBGLP0DKB5 382 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 PRCPP42785 496 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 CNTN1Q12860 1018 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 IMPG1Q17R60 797 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 PRR5LQ6MZQ0 368 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 KIAA1841Q6NSI8 718 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 TFB1MQ8WVM0 346 aaKnown RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 DGCR14Q96DF8 476 aaKnown RBP4.15□□□□□ -1.74
USH2A-201ENST00000307340 FTHL17Q9BXU8 183 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 PKP3Q9Y446 797 aa4.15□□□□□ -1.74
USH2A-201ENST00000307340 INO80B-WBP1J3KQ70 363 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms