RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 STKLD1Q8NE28 680 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 NOD2Q9HC29 1040 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 SLC24A3Q9HC58 644 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 CD274Q9NZQ7 290 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 HEY2Q9UBP5 337 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 LSM7Q9UK45 103 aaKnown RBP16.96■□□□□ 0.31
BRD3-201ENST00000303407 VCPP55072 806 aaKnown RBP16.96■□□□□ 0.31
BRD3-201ENST00000303407 WDR59Q6PJI9 974 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 NLRP9Q7RTR0 991 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 CHSY1Q86X52 802 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 PCDHAC2Q9Y5I4 1007 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 EPHB6O15197 1021 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 MICAL2O94851 1124 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 NQO1P15559 274 aaKnown RBP16.96■□□□□ 0.31
BRD3-201ENST00000303407 RGS2P41220 211 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 ZNF844Q08AG5 666 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 MAPRE1Q15691 268 aaKnown RBP16.96■□□□□ 0.31
BRD3-201ENST00000303407 ASPSCR1Q9BZE9 553 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 PIDD1Q9HB75 910 aa16.96■□□□□ 0.31
BRD3-201ENST00000303407 PMPCBO75439 489 aa16.96■□□□□ 0.3
BRD3-201ENST00000303407 FGRP09769 529 aa16.96■□□□□ 0.3
BRD3-201ENST00000303407 KIRREL3Q8IZU9 778 aa16.96■□□□□ 0.3
BRD3-201ENST00000303407 SNTG2Q9NY99 539 aa16.96■□□□□ 0.3
BRD3-201ENST00000303407 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.96■□□□□ 0.3
BRD3-201ENST00000303407 PCDHB7Q9Y5E2 793 aa16.96■□□□□ 0.3
BRD3-201ENST00000303407 SERPINB8P50452 374 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 GEMP55040 296 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 BST2Q10589 180 aaKnown RBP16.95■□□□□ 0.3
BRD3-201ENST00000303407 DAB2IPQ5VWQ8 1189 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 NUP93Q8N1F7 819 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 PCDH9Q9HC56 1237 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 HAO1Q9UJM8 370 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 PCDHGC5Q9Y5F6 944 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 NFAT5O94916 1531 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 GPR182O15218 404 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 TGFB3P10600 412 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 CYP2F1P24903 491 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 LRP10Q7Z4F1 713 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 RFWD2Q8NHY2 731 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 SLC30A1Q9Y6M5 507 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 ZBTB45Q96K62 511 aaPredicted RBP16.95■□□□□ 0.3
BRD3-201ENST00000303407 GANQ9H2C0 597 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 KDM4CQ9H3R0 1056 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 TAS2R14Q9NYV8 317 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 SLC24A2Q9UI40 661 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 AFDNP55196 1824 aaKnown RBP16.95■□□□□ 0.3
BRD3-201ENST00000303407 INSRRP14616 1297 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 ATP6V0D2Q8N8Y2 350 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 CCDC90BQ9GZT6 254 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 CD248Q9HCU0 757 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 ZNF212Q9UDV6 495 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 BARX2Q9UMQ3 279 aaPredicted RBP16.95■□□□□ 0.3
BRD3-201ENST00000303407 NAALADL1Q9UQQ1 740 aa16.95■□□□□ 0.3
BRD3-201ENST00000303407 TCN1P20061 433 aaPredicted RBP16.94■□□□□ 0.3
BRD3-201ENST00000303407 TDRD10Q5VZ19 366 aaKnown RBP16.94■□□□□ 0.3
BRD3-201ENST00000303407 TTC23LQ6PF05 361 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 CCNJLQ8IV13 435 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 SHCBP1Q8NEM2 672 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 DNAJC9Q8WXX5 260 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 CEP19Q96LK0 163 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 HARS2P49590 506 aaKnown RBP16.94■□□□□ 0.3
BRD3-201ENST00000303407 NDST1P52848 882 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 FAM131BQ86XD5 332 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 TNFRSF25Q93038 417 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 ADGRA2Q96PE1 1338 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 LOC100653049A0A140TA62 436 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 KRT34O76011 436 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 PPP3CAQ08209 521 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 CYTH1Q15438 398 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 VCPIP1Q96JH7 1222 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 TSPAN16Q9UKR8 245 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 FZD1Q9UP38 647 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.94■□□□□ 0.3
BRD3-201ENST00000303407 O00370 1275 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 PRRG1O14668 218 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 AKAP10O43572 662 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 SEC24DO94855 1032 aaPredicted RBP16.94■□□□□ 0.3
BRD3-201ENST00000303407 FUT2Q10981 343 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 GRIK4Q16099 956 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 LRRC23Q53EV4 343 aaPredicted RBP16.94■□□□□ 0.3
BRD3-201ENST00000303407 SPDYAQ5MJ70 313 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 TEX9Q8N6V9 391 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 TSEN2Q8NCE0 465 aaKnown RBP16.94■□□□□ 0.3
BRD3-201ENST00000303407 ACTL9Q8TC94 416 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 OSMRQ99650 979 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 ZNF446Q9NWS9 450 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 RCCD1A6NED2 376 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 APOA4P06727 396 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 YY1P25490 414 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 TWF1Q12792 350 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 TRAPPC12Q8WVT3 735 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 YY1AP1Q9H869 796 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 IARS2Q9NSE4 1012 aaKnown RBP16.94■□□□□ 0.3
BRD3-201ENST00000303407 PRG3Q9Y2Y8 225 aaPredicted RBP16.94■□□□□ 0.3
BRD3-201ENST00000303407 AAR2Q9Y312 384 aaKnown RBP16.94■□□□□ 0.3
BRD3-201ENST00000303407 AKAP12Q02952 1782 aa16.94■□□□□ 0.3
BRD3-201ENST00000303407 DNALI1O14645 258 aaPredicted RBP16.93■□□□□ 0.3
BRD3-201ENST00000303407 PRPF4O43172 522 aaKnown RBP eCLIP16.93■□□□□ 0.3
BRD3-201ENST00000303407 GRIN3BO60391 1043 aa16.93■□□□□ 0.3
BRD3-201ENST00000303407 GCLCP48506 637 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms