RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 RBM38Q9H0Z9 239 aaKnown RBP11.35□□□□□ -0.59
ZNF558-201ENST00000301475 DDTLA6NHG4 134 aaPredicted RBP11.34□□□□□ -0.59
ZNF558-201ENST00000301475 KBTBD13C9JR72 458 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 INHBAP08476 426 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 GTF2H1P32780 548 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 ELK3P41970 407 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 NCKAP1LP55160 1127 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 OTUD4Q01804 1114 aaKnown RBP11.34□□□□□ -0.59
ZNF558-201ENST00000301475 TCP10Q12799 353 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 TLR1Q15399 786 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 TFDP3Q5H9I0 405 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 SYCP2LQ5T4T6 812 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 DUS1LQ6P1R4 473 aaKnown RBP11.34□□□□□ -0.59
ZNF558-201ENST00000301475 KLHDC10Q6PID8 442 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 TMC7Q7Z402 723 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 HIPK4Q8NE63 616 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 MFSD14AQ96MC6 490 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 ST6GALNAC4Q9H4F1 302 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 ZBTB21Q9ULJ3 1066 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 PCDHGA4Q9Y5G9 962 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 SCINQ9Y6U3 715 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 QSER1Q2KHR3 1735 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 ZNF831Q5JPB2 1677 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 TRIM49D1C9J1S8 452 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 AP1G1O43747 822 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 CCNT2O60583 730 aaKnown RBP11.34□□□□□ -0.59
ZNF558-201ENST00000301475 CCDC166P0CW27 439 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 ACO1P21399 889 aaKnown RBP11.34□□□□□ -0.59
ZNF558-201ENST00000301475 JAG1P78504 1218 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 ZNF200P98182 395 aaPredicted RBP11.34□□□□□ -0.59
ZNF558-201ENST00000301475 TMEM62Q0P6H9 643 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 SPP2Q13103 211 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 ITGA9Q13797 1035 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 ZYXQ15942 572 aaKnown RBP11.34□□□□□ -0.59
ZNF558-201ENST00000301475 APOBEC3HQ6NTF7 200 aaKnown RBP11.34□□□□□ -0.59
ZNF558-201ENST00000301475 ENOSF1Q7L5Y1 443 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 PHF13Q86YI8 300 aaPredicted RBP11.34□□□□□ -0.59
ZNF558-201ENST00000301475 ABRAQ8N0Z2 381 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 TMC2Q8TDI7 906 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 ZNF516Q92618 1163 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 E2F7Q96AV8 911 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 GMCL1Q96IK5 515 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 SIRPGQ9P1W8 387 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 IP6K2Q9UHH9 426 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 XPO7Q9UIA9 1087 aaKnown RBP11.34□□□□□ -0.59
ZNF558-201ENST00000301475 BLOC1S6Q9UL45 172 aa11.34□□□□□ -0.59
ZNF558-201ENST00000301475 SDR42E2A6NKP2 422 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 TTC36A6NLP5 189 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 C1QAP02745 245 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 SERPINA6P08185 405 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 CDK4P11802 303 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 RAG1P15918 1043 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 DESP17661 470 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 AOC1P19801 751 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 PCSK6P29122 969 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 ECE1P42892 770 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 FOLH1Q04609 750 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 NADK2Q4G0N4 442 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 ZCCHC23Q6ZST2 131 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 MIER3Q7Z3K6 550 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 PCGF5Q86SE9 256 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 MAP4K3Q8IVH8 894 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 PDIK1LQ8N165 341 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 EFCAB3Q8N7B9 438 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 TMEM161BQ8NDZ6 487 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 FBXL18Q96ME1 805 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 RILPQ96NA2 401 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 MCEEQ96PE7 176 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 GCNAQ96QF7 691 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 IQCGQ9H095 443 aaKnown RBP11.33□□□□□ -0.6
ZNF558-201ENST00000301475 TMEM165Q9HC07 324 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 TBX20Q9UMR3 447 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 PLLPQ9Y342 182 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 PCDHAC2Q9Y5I4 1007 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 MYOCOSA0A1B0GUC4 107 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 TMEM191CA6NGB0 347 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 CAPN8A6NHC0 703 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 H3BNX3 289 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 MMP10P09238 476 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 TMEM191BP0C7N4 346 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 GNA15P30679 374 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 MAGEA10P43363 369 aaPredicted RBP11.33□□□□□ -0.6
ZNF558-201ENST00000301475 EMP3P54852 163 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 WNT7BP56706 349 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 EN1Q05925 392 aaPredicted RBP11.33□□□□□ -0.6
ZNF558-201ENST00000301475 SNAPC2Q13487 334 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 TMEM259Q4ZIN3 620 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 PAOXQ6QHF9 649 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 B3GNT6Q6ZMB0 384 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 UNC45BQ8IWX7 931 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 GMCL1P1Q8NEA9 526 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 JDP2Q8WYK2 163 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 SHCBP1LQ9BZQ2 653 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 UBAP1Q9NZ09 502 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 NDUFA13Q9P0J0 144 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 CIDEBQ9UHD4 219 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 IKBKGQ9Y6K9 419 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 SF3B1O75533 1304 aaKnown RBP eCLIP11.33□□□□□ -0.6
ZNF558-201ENST00000301475 A0A0B4J269 797 aa11.33□□□□□ -0.6
ZNF558-201ENST00000301475 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms