RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 DCP1AQ9NPI6 582 aaPredicted RBP15.36■□□□□ 0.05
SCN3B-201ENST00000299333 TMCC3Q9ULS5 477 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 CLOCKO15516 846 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 FCGR1AP12314 374 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 PECAM1P16284 738 aaPredicted RBP15.36■□□□□ 0.05
SCN3B-201ENST00000299333 ITGAXP20702 1163 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 PSMA3P25788 255 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 TRAF3Q13114 568 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 C1DQ13901 141 aaKnown RBP15.36■□□□□ 0.05
SCN3B-201ENST00000299333 SGMS1Q86VZ5 419 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 SRBD1Q8N5C6 995 aaKnown RBP15.36■□□□□ 0.05
SCN3B-201ENST00000299333 NSUN6Q8TEA1 469 aaKnown RBP15.36■□□□□ 0.05
SCN3B-201ENST00000299333 STK32AQ8WU08 396 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 KCTD14Q9BQ13 255 aaPredicted RBP15.36■□□□□ 0.05
SCN3B-201ENST00000299333 SLC7A5P2Q9GIP4 190 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 TUBGCP4Q9UGJ1 667 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 MBD5Q9P267 1494 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 NCF1BA6NI72 391 aaPredicted RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 NCF1CA8MVU1 366 aaPredicted RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 NCF1P14598 390 aaPredicted RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 TGM2P21980 687 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 FASP25445 335 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 MZF1P28698 734 aaPredicted RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 RAD23AP54725 363 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 VAC14Q08AM6 782 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 ATP6AP1LQ52LC2 224 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 B3GNT6Q6ZMB0 384 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 TMPRSS6Q8IU80 811 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 CYP4F12Q9HCS2 524 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 CAPN6Q9Y6Q1 641 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 TNPO2O14787 897 aaKnown RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 GRIK1P39086 918 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 FAR2Q96K12 515 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 CCT8P50990 548 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 CSE1LP55060 971 aaKnown RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 EPHA7Q15375 998 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 SUPT20HL1Q3ZLR7 823 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 ZRANB3Q5FWF4 1079 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 SPANXN2Q5MJ10 180 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 CYP4A22Q5TCH4 519 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 AGAP9Q5VTM2 703 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 SNRNP48Q6IEG0 339 aaKnown RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 ELMOD1Q8N336 334 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 TDRD5Q8NAT2 981 aaKnown RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 YIPF2Q9BWQ6 316 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 EPB41L4AQ9HCS5 686 aaPredicted RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 MROH7Q68CQ1 1323 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 SNAP23O00161 211 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 PDE9AO76083 593 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 PGM3O95394 542 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 KRT20P35900 424 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 ALDH5A1P51649 535 aaPredicted RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 STX12Q86Y82 276 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 CROCCP3Q8IVE0 287 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 FEZF2Q8TBJ5 459 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 UTP15Q8TED0 518 aaKnown RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 ZNF560Q96MR9 790 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 GPRC5DQ9NZD1 345 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 DMGDHQ9UI17 866 aaKnown RBP15.35■□□□□ 0.05
SCN3B-201ENST00000299333 SNX9Q9Y5X1 595 aa15.35■□□□□ 0.05
SCN3B-201ENST00000299333 CCDC162PA2VCL2 907 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 HMBSP08397 361 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 CDC16Q13042 620 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 RORBQ92753 470 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 PACSIN1Q9BY11 444 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 TUFT1Q9NNX1 390 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 FEM1BQ9UK73 627 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 NEO1Q92859 1461 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 A0A1W2PRG6 482 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 HEATR9A2RTY3 570 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 BBOX1O75936 387 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 VIL1P09327 827 aaKnown RBP15.34■□□□□ 0.05
SCN3B-201ENST00000299333 GSTM1P09488 218 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 EPB42P16452 691 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 CSNK2BP67870 215 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 CLEC16AQ2KHT3 1053 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 KCNT1Q5JUK3 1230 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 TRIM65Q6PJ69 517 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 RNF19BQ6ZMZ0 732 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 KYQ8NBH2 561 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 MAGED4Q96JG8 741 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 NRDE2Q9H7Z3 1164 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 POLR1BQ9H9Y6 1135 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 WWOXQ9NZC7 414 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 RPS6KL1Q9Y6S9 549 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 ZC3H4Q9UPT8 1303 aaKnown RBP15.34■□□□□ 0.05
SCN3B-201ENST00000299333 PTGES3LE9PB15 166 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 UBXN8O00124 270 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 VWA5AO00534 786 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 CPB1P15086 417 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 S100A1P23297 94 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 GSSP48637 474 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 DDR2Q16832 855 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 PGS1Q32NB8 556 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 ZC2HC1CQ53FD0 456 aaPredicted RBP15.34■□□□□ 0.05
SCN3B-201ENST00000299333 C11orf63Q6NUN7 778 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 OR6Y1Q8NGX8 325 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 FBXO25Q8TCJ0 367 aa15.34■□□□□ 0.05
SCN3B-201ENST00000299333 POLRMTO00411 1230 aaKnown RBP15.34■□□□□ 0.05
SCN3B-201ENST00000299333 IDH3BO43837 385 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms