RNA–Protein interactions for RNA: ENST00000299259.10

COPS2-201, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 1 (best) BASIC

Gene COPS2, Length 2,036 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-201ENST00000299259 LRRC19Q9H756 370 aa11.02□□□□□ -0.64
COPS2-201ENST00000299259 ELAC1Q9H777 363 aaKnown RBP11.02□□□□□ -0.64
COPS2-201ENST00000299259 TBC1D13Q9NVG8 400 aa11.02□□□□□ -0.64
COPS2-201ENST00000299259 NFU1Q9UMS0 254 aa11.02□□□□□ -0.64
COPS2-201ENST00000299259 MYBPHLA2RUH7 354 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 BHMG1C9JSJ3 638 aaPredicted RBP11.02□□□□□ -0.65
COPS2-201ENST00000299259 MAP2K7O14733 419 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 RRP9O43818 475 aaKnown RBP11.02□□□□□ -0.65
COPS2-201ENST00000299259 DDHD2O94830 711 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 IL1R2P27930 398 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 COILP38432 576 aaPredicted RBP11.02□□□□□ -0.65
COPS2-201ENST00000299259 RNASELQ05823 741 aaKnown RBP11.02□□□□□ -0.65
COPS2-201ENST00000299259 TAF5Q15542 800 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 CDO1Q16878 200 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 C15orf59Q2T9L4 293 aaPredicted RBP11.02□□□□□ -0.65
COPS2-201ENST00000299259 INTS6LQ5JSJ4 861 aaKnown RBP11.02□□□□□ -0.65
COPS2-201ENST00000299259 MFSD7Q6UXD7 560 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 SND1Q7KZF4 910 aaKnown RBP eCLIP11.02□□□□□ -0.653e-7■□□□□ 11.2
COPS2-201ENST00000299259 ANKS1BQ7Z6G8 1248 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 CCDC105Q8IYK2 499 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 MYCBPAPQ8TBZ2 947 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 CLEC4CQ8WTT0 213 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 C1orf54Q8WWF1 131 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 ATG4AQ8WYN0 398 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.02□□□□□ -0.65
COPS2-201ENST00000299259 SEC14L1Q92503 715 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 RAPGEF5Q92565 580 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 CFAP57Q96MR6 1250 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 GDAP1L1Q96MZ0 367 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 RTP3Q9BQQ7 232 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 CRISPLD2Q9H0B8 497 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 HOMER3Q9NSC5 361 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 USP18Q9UMW8 372 aa11.02□□□□□ -0.65
COPS2-201ENST00000299259 hCG_1818297A0A087WSY0 165 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 F8W810 466 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 TMEM189-UBE2V1I3L0A0 370 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 TJP3O95049 919 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 ECEL1O95672 775 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 TYMPP19971 482 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 CDKN2BP42772 138 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 PTGIRP43119 386 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 ATP11AP98196 1134 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 NNTQ13423 1086 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 TRIM60Q495X7 471 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 KCNT1Q5JUK3 1230 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 KAZNQ674X7 775 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 OVOS1Q6IE37 1185 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 SLC39A5Q6ZMH5 540 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 ARCQ7LC44 396 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 ZNF280BQ86YH2 543 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 COLGALT2Q8IYK4 626 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 SIX6OS1Q8N1H7 587 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 KCTD13Q8WZ19 329 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 SLCO2A1Q92959 643 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 CAVIN3Q969G5 261 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 MYLPFQ96A32 169 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 SMARCD1Q96GM5 515 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 FAM193BQ96PV7 902 aaPredicted RBP11.01□□□□□ -0.65
COPS2-201ENST00000299259 PEBP4Q96S96 227 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 ACBD6Q9BR61 282 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 ERP44Q9BS26 406 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 DCLK3Q9C098 648 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 DPH5Q9H2P9 285 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 LRRC4Q9HBW1 653 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 NGRNQ9NPE2 291 aaKnown RBP11.01□□□□□ -0.65
COPS2-201ENST00000299259 FAM114A2Q9NRY5 505 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 CHST7Q9NS84 486 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 PCSK1NQ9UHG2 260 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 PCDHB8Q9UN66 801 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 PCDHB7Q9Y5E2 793 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 ZNF638Q14966 1978 aaKnown RBP11.01□□□□□ -0.65
COPS2-201ENST00000299259 DCDC2CA8MYV0 355 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 ENPP3O14638 875 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 DAPK3O43293 454 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 PRPSAP2O60256 369 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 HSF2BPO75031 334 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 AP1G2O75843 785 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 BEST1O76090 585 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 PARNO95453 639 aaKnown RBP11.01□□□□□ -0.65
COPS2-201ENST00000299259 TRUB2O95900 331 aaKnown RBP11.01□□□□□ -0.65
COPS2-201ENST00000299259 KRT10P13645 584 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 ECHS1P30084 290 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 PTPN9P43378 593 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 OR1G1P47890 313 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 MNX1P50219 401 aaPredicted RBP11.01□□□□□ -0.65
COPS2-201ENST00000299259 MAP3K7CLP57077 242 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 TRADDQ15628 312 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 CCDC14Q49A88 953 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 EFHC1Q5JVL4 640 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 SH3PXD2AQ5TCZ1 1133 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 DDX42Q86XP3 938 aaKnown RBP eCLIP11.01□□□□□ -0.65
COPS2-201ENST00000299259 THEM5Q8N1Q8 247 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 GRK7Q8WTQ7 553 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 FAM172AQ8WUF8 416 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 KHSRPQ92945 711 aaKnown RBP eCLIP11.01□□□□□ -0.651e-7■■■■□ 19.4
COPS2-201ENST00000299259 SCLYQ96I15 445 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 ZNF333Q96JL9 665 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 NCAPGQ9BPX3 1015 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 PPP1R12CQ9BZL4 782 aa11.01□□□□□ -0.65
COPS2-201ENST00000299259 TRIM31Q9BZY9 425 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms