RNA–Protein interactions for RNA: ENST00000299240.10

TTC17-202, Transcript of tetratricopeptide repeat domain 17, humanhuman

TSL 1 (best) BASIC

Gene TTC17, Length 3,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC17-202ENST00000299240 RWDD4Q6NW29 188 aaKnown RBP13.22□□□□□ -0.29
TTC17-202ENST00000299240 GPRIN1Q7Z2K8 1008 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 ANKMY2Q8IV38 441 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 ACTL9Q8TC94 416 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 ARL8AQ96BM9 186 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 FAM81BQ96LP2 452 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 SULT1E1P49888 294 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 KRT71Q3SY84 523 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 SYPL2Q5VXT5 272 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 OVOS1Q6IE37 1185 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.22□□□□□ -0.29
TTC17-202ENST00000299240 RTN4RL1Q86UN2 441 aaPredicted RBP13.22□□□□□ -0.29
TTC17-202ENST00000299240 TTC9BQ8N6N2 239 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 CCDC89Q8N998 374 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 MGARPQ8TDB4 240 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 FMO2Q99518 471 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 HIPK3Q9H422 1215 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 NENFQ9UMX5 172 aa13.22□□□□□ -0.29
TTC17-202ENST00000299240 GPD1P21695 349 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 COILP38432 576 aaPredicted RBP13.21□□□□□ -0.29
TTC17-202ENST00000299240 CDC42EP1Q00587 391 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 TRIM60Q495X7 471 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 PLEKHA7Q6IQ23 1121 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 TRNP1Q6NT89 227 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 DARS2Q6PI48 645 aaKnown RBP13.21□□□□□ -0.29
TTC17-202ENST00000299240 PHF13Q86YI8 300 aaPredicted RBP13.21□□□□□ -0.29
TTC17-202ENST00000299240 ACTRT1Q8TDG2 376 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 GIPC2Q8TF65 315 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 RSAD2Q8WXG1 361 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 BCO2Q9BYV7 579 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 LRRC4CQ9HCJ2 640 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 PLAAQ9Y263 795 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 VCANP13611 3396 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 RNF40O75150 1001 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 CCL5P13501 91 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 ATICP31939 592 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 ARSEP51690 589 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 ZNF132P52740 706 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 OTUD4Q01804 1114 aaKnown RBP13.21□□□□□ -0.29
TTC17-202ENST00000299240 PTP4A2Q12974 167 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 MGAT5BQ3V5L5 792 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 LEKR1Q6ZMV7 388 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 MTERF4Q7Z6M4 381 aaKnown RBP13.21□□□□□ -0.29
TTC17-202ENST00000299240 FUKQ8N0W3 1084 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 C3orf20Q8ND61 904 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 DDX27Q96GQ7 796 aaKnown RBP13.21□□□□□ -0.29
TTC17-202ENST00000299240 PAWRQ96IZ0 340 aaKnown RBP13.21□□□□□ -0.29
TTC17-202ENST00000299240 TNIP3Q96KP6 325 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 MAF1Q9H063 256 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 TMEM30AQ9NV96 361 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 RASAL2Q9UJF2 1139 aa13.21□□□□□ -0.29
TTC17-202ENST00000299240 MSI1O43347 362 aaKnown RBP13.21□□□□□ -0.3
TTC17-202ENST00000299240 FAM200BP0CF97 657 aa13.21□□□□□ -0.3
TTC17-202ENST00000299240 HOXD8P13378 290 aaPredicted RBP13.21□□□□□ -0.3
TTC17-202ENST00000299240 PRLRP16471 622 aa13.21□□□□□ -0.3
TTC17-202ENST00000299240 LHX8Q68G74 356 aa13.21□□□□□ -0.3
TTC17-202ENST00000299240 C11orf63Q6NUN7 778 aa13.21□□□□□ -0.3
TTC17-202ENST00000299240 LRRC8DQ7L1W4 858 aa13.21□□□□□ -0.3
TTC17-202ENST00000299240 METTL23Q86XA0 190 aa13.21□□□□□ -0.3
TTC17-202ENST00000299240 ZIM3Q96PE6 472 aa13.21□□□□□ -0.3
TTC17-202ENST00000299240 FAM204AQ9H8W3 233 aa13.21□□□□□ -0.3
TTC17-202ENST00000299240 PCDHB7Q9Y5E2 793 aa13.21□□□□□ -0.3
TTC17-202ENST00000299240 PLXNA1Q9UIW2 1896 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 WDR81Q562E7 1941 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 ATF2P15336 505 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 GAD2Q05329 585 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 P3H1Q32P28 736 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 ARFGAP1Q8N6T3 406 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 CXorf38Q8TB03 319 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 SPATA18Q8TC71 538 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 CRTAC1Q9NQ79 661 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 TMLHEQ9NVH6 421 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 DDIT4Q9NX09 232 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 STRIP2Q9ULQ0 834 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 ANKRD65E5RJM6 399 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 NRP1O14786 923 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 PMM2O15305 246 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 SYN1P17600 705 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 ANXA13P27216 316 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 POU5F1BQ06416 359 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 PRSS55Q6UWB4 352 aaPredicted RBP13.2□□□□□ -0.3
TTC17-202ENST00000299240 MYLPFQ96A32 169 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 PEBP4Q96S96 227 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 SEMA4AQ9H3S1 761 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 CYP3A43Q9HB55 503 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 TMEM39AQ9NV64 488 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 CNTN3Q9P232 1028 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 SFMBT1Q9UHJ3 866 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 GOLGA6L10A6NI86 522 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 YJEFN3A6XGL0 299 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 E7ENQ6 273 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 MYBL1P10243 752 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 PECAM1P16284 738 aaPredicted RBP13.2□□□□□ -0.3
TTC17-202ENST00000299240 AMPD1P23109 780 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 KYNUQ16719 465 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 SPOCD1Q6ZMY3 1216 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 TMEM173Q86WV6 379 aaPredicted RBP13.2□□□□□ -0.3
TTC17-202ENST00000299240 USP33Q8TEY7 942 aa13.2□□□□□ -0.3
TTC17-202ENST00000299240 TBCBQ99426 244 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms