RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 DLG1Q12959 904 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 PEX6Q13608 980 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 CYTH1Q15438 398 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 SPDYAQ5MJ70 313 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 WDR78Q5VTH9 848 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 TTC39BQ5VTQ0 682 aaPredicted RBP11.88□□□□□ -0.51
TRUB1-201ENST00000298746 RBM44Q6ZP01 1051 aaKnown RBP11.88□□□□□ -0.51
TRUB1-201ENST00000298746 SEPT12Q8IYM1 358 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 TTC13Q8NBP0 860 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 DCAKDQ8WVC6 231 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 ZNF606Q8WXB4 792 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 GMCL1Q96IK5 515 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 LRGUKQ96M69 825 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 TRIM56Q9BRZ2 755 aaKnown RBP11.88□□□□□ -0.51
TRUB1-201ENST00000298746 KCNK13Q9HB14 408 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 TXNDC16Q9P2K2 825 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 NXF1Q9UBU9 619 aaKnown RBP11.88□□□□□ -0.51
TRUB1-201ENST00000298746 DNAJC16Q9Y2G8 782 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 DTNAQ9Y4J8 743 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 IRS2Q9Y4H2 1338 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 SCN7AQ01118 1682 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 ATRNL1Q5VV63 1379 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 CLRN2A0PK11 232 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 DNAJC6O75061 913 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 TMEM63AO94886 807 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 CYP1A1P04798 512 aaPredicted RBP11.88□□□□□ -0.51
TRUB1-201ENST00000298746 PDE1BQ01064 536 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 TRPC3Q13507 836 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 SFT2D3Q587I9 215 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 ACBD5Q5T8D3 534 aaPredicted RBP11.88□□□□□ -0.51
TRUB1-201ENST00000298746 POLNQ7Z5Q5 900 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 SLC26A11Q86WA9 606 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 LRRN4Q8WUT4 740 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 DDX56Q9NY93 547 aaKnown RBP11.88□□□□□ -0.51
TRUB1-201ENST00000298746 RBAKQ9NYW8 714 aaPredicted RBP11.88□□□□□ -0.51
TRUB1-201ENST00000298746 DRG1Q9Y295 367 aaKnown RBP11.88□□□□□ -0.51
TRUB1-201ENST00000298746 CNTNAP4Q9C0A0 1308 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 CAPN8A6NHC0 703 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 RPL10AP62906 217 aaKnown RBP11.88□□□□□ -0.51
TRUB1-201ENST00000298746 MTERF2Q49AM1 385 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 GPAT2Q6NUI2 795 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 C16orf46Q6P387 395 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 SIAH1Q8IUQ4 282 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 TMEM161BQ8NDZ6 487 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 DEPDC1BQ8WUY9 529 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 S100A14Q9HCY8 104 aa11.88□□□□□ -0.51
TRUB1-201ENST00000298746 AGO2Q9UKV8 859 aaKnown RBP11.88□□□□□ -0.51
TRUB1-201ENST00000298746 C10orf71Q711Q0 1435 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 LYPLA1O75608 230 aaPredicted RBP11.87□□□□□ -0.51
TRUB1-201ENST00000298746 TGDSO95455 350 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 ITGAVP06756 1048 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 KRT19P08727 400 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 KRT3P12035 628 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 UQCRBP14927 111 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 TPP2P29144 1249 aaPredicted RBP11.87□□□□□ -0.51
TRUB1-201ENST00000298746 ROR1Q01973 937 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 PTP4A2Q12974 167 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 PSMD6Q15008 389 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 UGCGQ16739 394 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 CDHR3Q6ZTQ4 885 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 ACAD11Q709F0 780 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 C12orf56Q8IXR9 622 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 IL31RAQ8NI17 732 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 TMEM165Q9HC07 324 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 SMCHD1A6NHR9 2005 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 PIK3R2O00459 728 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 NOP56O00567 594 aaKnown RBP11.87□□□□□ -0.51
TRUB1-201ENST00000298746 DKC1O60832 514 aaKnown RBP eCLIP11.87□□□□□ -0.51
TRUB1-201ENST00000298746 KCNA4P22459 653 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 RAP1GDS1P52306 607 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 PIGHQ14442 188 aaPredicted RBP11.87□□□□□ -0.51
TRUB1-201ENST00000298746 MAP3K21Q5TCX8 1036 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 KLHL23Q8NBE8 558 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 ATP2A3Q93084 1043 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 MMP19Q99542 508 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 XAB2Q9HCS7 855 aaKnown RBP11.87□□□□□ -0.51
TRUB1-201ENST00000298746 GABBR1Q9UBS5 961 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 STRIP2Q9ULQ0 834 aa11.87□□□□□ -0.51
TRUB1-201ENST00000298746 COL22A1Q8NFW1 1626 aaPredicted RBP11.87□□□□□ -0.51
TRUB1-201ENST00000298746 DDX60LQ5H9U9 1706 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 AIM2O14862 343 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 KRT7P08729 469 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 VIL1P09327 827 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 PMLP29590 882 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 CHN2P52757 468 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 PSMC1P62191 440 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 FOLH1Q04609 750 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 C1QBPQ07021 282 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 KRT81Q14533 505 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 PLEKHA7Q6IQ23 1121 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 IGDCC3Q8IVU1 814 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 CCDC33Q8N5R6 958 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 LENG1Q96BZ8 264 aaPredicted RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 IFT43Q96FT9 208 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 CLMNQ96JQ2 1002 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 PHF12Q96QT6 1004 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 PRPF18Q99633 342 aaKnown RBP11.86□□□□□ -0.51
TRUB1-201ENST00000298746 MSTO1Q9BUK6 570 aa11.86□□□□□ -0.51
TRUB1-201ENST00000298746 SSU72Q9NP77 194 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms